Gene Information

Name : EcE24377A_0230 (EcE24377A_0230)
Accession : YP_001461389.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Unknown
Product : type VI secretion-associated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 248755 - 249498 bp
Length : 744 bp
Strand : -
Note : identified by match to protein family HMM TIGR03360

DNA sequence :
ATGAGCAGGTTGCGCGTTTTCCGGCAGACAGGATGGTTTATCGCGGGCCTGATGACGGGCTTACCCGCCACTGCCGCGCC
CGCAGAAGCATCGTCAATGGCCGGTGTGGCGGTCGCCGTCGCCACCACGACCCCGCCGGATGCGACAGCCACGTTACAGG
CCATGCAGTCCTGTCGGCGGGAGTCCGCGGCGCTGGAGCGGCTTGACTGCTATGACCGCCTGCTGGCACCGCTGTCCCCG
TCAGGGTTTGACGGGGCGCTGGTCAAAGCCGGTTTTGTGGGCGAGGCCTGGACCCGCGCCACAGAGCAGGAAAAACGCCG
CGAGGGCAACACCACAGAACTGCTGGTGACGCAGGTGCCGGGGGAGCGCCCGACGGTGGTGATAACCACCCCGGCTATCG
GTCATGTTCCGCCACGCCCGGTGCTGATGTTCAGTTGCGTGGACAATATCACCCGGATGCAGGTGGCGCTGATGCACCCT
CTGGATGTCCATGATATCGCCGTCACTCTGAATGCCGACAACCGGGCATTGCGCAGCCACTGGTTTGTGCGCGAGAACGG
CACCCTGCTGGAGTCCAGCCGGGGGTTATCCGGGATTGATGAAATTAAGCAACTGTTCGGCGCAAAAACGCTGACGGTGG
ATACCGGCGCAGACAATGCCGCCGGAAAGCTGACCTTTAACATTGACGGGCTGGCAAGGGCGATTGCTCCCCTGCGCGAT
GCCTGCCACTGGGCGGGAGAATAA

Protein sequence :
MSRLRVFRQTGWFIAGLMTGLPATAAPAEASSMAGVAVAVATTTPPDATATLQAMQSCRRESAALERLDCYDRLLAPLSP
SGFDGALVKAGFVGEAWTRATEQEKRREGNTTELLVTQVPGERPTVVITTPAIGHVPPRPVLMFSCVDNITRMQVALMHP
LDVHDIAVTLNADNRALRSHWFVRENGTLLESSRGLSGIDEIKQLFGAKTLTVDTGADNAAGKLTFNIDGLARAIAPLRD
ACHWAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec28 YP_851417.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-89 91