Gene Information

Name : ECSE_0227 (ECSE_0227)
Accession : YP_002291502.1
Strain : Escherichia coli SE11
Genome accession: NC_011415
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 259470 - 260945 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTACAGGAAGAGGAACTCGTTTCCAGTCATGCCGGGCAGCCTGAGCAGGCATCGTCGCTGCTTGATCAAATCAT
GGCACAGACCCGTATTCAGCCCGGTTCGGAAGGTTATGACGTTGCCCGCCAGGGTGTGACAGCCTTTATTGCCAGCATCC
TGCAATCCACTGCATCTGCCGAACCGGTCAATAAACTGGCCGTGGACAGCATGATTGCAGATATAGATGAACGCATCAGC
CGCCAGATGGATGTCATCATCCATGCGCCTGCCTTTCAGCAGGTCGAGTCGTTCTGGCGCTCACTGAAAACCATGGTGGA
TCGCGTTGATTTCCGTGAAAACATCAAGGTCAACGTGCTTCATGTCACGAAGCAGGAACTTCTGGAAGACTTTGAATTTG
CCCCAGAAATTATTCAGTCCGGATTTTATAAACACGTTTATTCGTCCGGATTCGGACAGTTTGGTGGTGAACCCATCGCT
GCCGTGCTGGGCGCTTATGAGTTCAAAAATACCGCACCTGACATGAAACTGCTGCAATACGTCAGTGCTGTGGGCGCAAT
GGCGCACGCACCGTTCCTGTCCTCCGTTTCCCCGGAGTTTATGGGGCTGAACTCGTGGACCGAACTGCCTAATATCAAAG
ATCTTTATGCCATCTTTGAAGGTCCGGCCTACACCAAATGGCGCGCCCTGCGTGACTCGGAAGATTCGCGCTATTTAGGG
CTTACGGCACCCCGCTTCCTGCTTCGCCAGCCTTATTCACCAACAGATAACCCTGTTAAGAACTTTAACTATCACGAAGA
TGTCAGCCGGAATCACGAAGATTATCTGTGGGGTAATACGGCCTGGATGCTGGCGTGCAATGTCGCAGACAGTTTTGCCA
AATACCGCTGGTGTCCAAATATCATCGGTCCGCAAAGCGGCGGTGCAGTGAAAGATCTGCCGGTGCATCTGTTCGAAACG
ATGGGTCAGATTCAGGCCAAAATCCCAACCGAGGTGCTGGTCACCGATCGCCGCGAATTTGAACTGGCTGAAGAGGGTTT
TATCACCCTTACCATGCGTAAAGACTCTGATAATGCAGCCTTTTTCTCTGCAAACTCGGTACAAAAACCGAAGCACTTTC
CGGGTAAAGACGCAGAAACCAACTATAAGTTGGGTACGCAGCTTCCTTATCTCTTCATCATCAATCGGTTAGCGCACTAC
ATCAAGGTGTTGCAGCGTGAGCAACTGGGGTCATGGAAAGAAAGGAGCGACTTAGAGAGGGAGCTTAATACCTGGATCCG
TCAGTATGTTGCCGACCAGGAAAACCCGCCTGCGGACGTGCGCAGCCGCAAGCCTCTGCGTGCTGCCAGAGTTGAGGTTA
TGGATGTGGAAGGCGAACCCGGCTGGTACCAGGTCGCGCTGAGCGTGCGGCCCCATTTTAAATTTATGGGGGCAAACTTT
GAGCTTTCCCTGGTTGGCCGGTTAGACAGGGAGTAA

Protein sequence :
MSLQEEELVSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAVDSMIADIDERIS
RQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELLEDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIA
AVLGAYEFKNTAPDMKLLQYVSAVGAMAHAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLG
LTAPRFLLRQPYSPTDNPVKNFNYHEDVSRNHEDYLWGNTAWMLACNVADSFAKYRWCPNIIGPQSGGAVKDLPVHLFET
MGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSANSVQKPKHFPGKDAETNYKLGTQLPYLFIINRLAHY
IKVLQREQLGSWKERSDLERELNTWIRQYVADQENPPADVRSRKPLRAARVEVMDVEGEPGWYQVALSVRPHFKFMGANF
ELSLVGRLDRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 77
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 0.0 77
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-149 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSE_0227 YP_002291502.1 hypothetical protein VFG2093 Protein 0.0 74
ECSE_0227 YP_002291502.1 hypothetical protein VFG2475 Protein 2e-155 58