Gene Information

Name : LF82_028 (LF82_028)
Accession : YP_002555191.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 262708 - 263226 bp
Length : 519 bp
Strand : +
Note : corresponding to LF82_p028 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; E24377A; ED1a; HS; IAI1; EDL933; EC4115; 157_H7; S88; SE11; UMN026; UTI89

DNA sequence :
ATGCCAACCCCATGTTACATTTCAATTACAGGTCAGACCCAGGGGAACATCACTGCCGGTGCTTTCACCGCAGATTCTGT
CGGCAATATCTACGTGCAGGGACACGAAGATGAAATGCTGGTGCAGGAGTTTCTGCATAACGTTACTGTTCCAACCGATC
CGCAGTCTGGTCAGCCTTCCGGGCAGCGTGCTCACAAACCGTTCATTTTCACCGTGGCGCTGAACAAAGCCGTTCCGCTG
CTGTACAACGCGCTGGCCTCCGGTGAAATGCTGCCGAAAGTGGAGCTGCACTGGTGGCGTACCTCTGTTGAAGGCAAGCA
GGAGCACTACTTCACCACACGTCTTACTGACGCGACGATTGTGGACATGAACCTGCATATGCCGCACTGCCAGGACCCTG
CACAGCGTGAGTTTACGCAATTGCTCGCAGTATCACTGGCCTACCGTAAGGTTGAGTGGGAGCACATCAAATCCGGTACT
TCTGGTGCCGATGACTGGCGTGCACCGCTGGAAGCATAA

Protein sequence :
MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPSGQRAHKPFIFTVALNKAVPL
LYNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATIVDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKSGT
SGADDWRAPLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-79 100
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 6e-79 100
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 2e-48 62