Gene Information

Name : EcE24377A_0236 (EcE24377A_0236)
Accession : YP_001461395.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 256189 - 257271 bp
Length : 1083 bp
Strand : -
Note : identified by similarity to GB:BAB33651.1; match to protein family HMM PF06996; match to protein family HMM TIGR03347

DNA sequence :
ATGGACGGAAAGAACCGGGCAGCATCCTCTTATCTGAGTCCGGGAAATCCCTCGGCAGATAAAGAGCAGAATGAGCCGCT
GGCACAGGTTTTTCATAACGCCTGCTCTTACAATTTTTTTGCGATGGCGGAGCTGTTGCACCGCCTGGCACAGGGTGAAA
AGGGGACGCCAGAATTATCCCTGCGCGACGATCCGACACAGGAAACCCTGCGTTTCAGCGCCGATGCCAGCCTTGCGTTT
CCCCTGAGTGATATCAGTGCGCTGAAACGGGATACGTCAGGGGCATTCAGGATGACCACCACCTTTATGGGGTTACAGGG
GAGCCAGTCGCCTCTCCCCGGTTATTACCTCGATCACCTGGCCTGGAAAGCGGTACATGAACAAAGTCCGGTAGGTGATT
TTCTGGATATGTTCAGCCACCGCCTGACCCAGTTTGTCTGGCATATCTGGCGTAAGTACCGCTATCACATCAGTTTTCGT
AACGGCGGTGTGGATGCGTTCTCGCAGCGCATGTACTCCCTTGTCGGGCTGGGCCACCGCCAGCTTCGCGATAAGCTGGC
GATTAATCACAGCAAAATGCTGGCGTATTCCGGGATCCTGGCAAACCCGGGGCGATCCCCGGAAATTATCTGTGGCCTGG
TGTCCCACTGCTTTGATTTGTCAGAAGTGACGCTGCAAAACTGGCAGCGTCGCAAGGTGGATATTGAACCGGATCAGCAA
AATAGTCTGGGGAGCTATTCACTTAAAAATGGCGAAAAACTGGCGGGAAGATCGGTACTGGGCAACTTTGTTCTGGGTAC
ACGGGTGCCCGATCTCAGCGGAAAATTCCAGCTCAGTATTACCAGCCTGACCCGAAAACAGTTCCTCTCTTTTCTGCCGT
CCGGCGAAAACTTCCTGCCACTGACGATGTTTGTGTCCTTCATCCTGCGCGATCAGCTTGCCTGGGACTTACATCTGGGG
CTGGCGCCGGAGCAGGTGGGCGCAATGCGCCTGGGCGATAACAAAAGTGCGCTGCTGGGCTGGACCAGCTTCCTCGGCAC
ACCGGAAGAACGACCCTCAGTCACCATCAGGGTACGGTCGTAA

Protein sequence :
MDGKNRAASSYLSPGNPSADKEQNEPLAQVFHNACSYNFFAMAELLHRLAQGEKGTPELSLRDDPTQETLRFSADASLAF
PLSDISALKRDTSGAFRMTTTFMGLQGSQSPLPGYYLDHLAWKAVHEQSPVGDFLDMFSHRLTQFVWHIWRKYRYHISFR
NGGVDAFSQRMYSLVGLGHRQLRDKLAINHSKMLAYSGILANPGRSPEIICGLVSHCFDLSEVTLQNWQRRKVDIEPDQQ
NSLGSYSLKNGEKLAGRSVLGNFVLGTRVPDLSGKFQLSITSLTRKQFLSFLPSGENFLPLTMFVSFILRDQLAWDLHLG
LAPEQVGAMRLGDNKSALLGWTSFLGTPEERPSVTIRVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-95 57
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 1e-95 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_0236 YP_001461395.1 hypothetical protein VFG2079 Protein 6e-61 41