Gene Information

Name : CFSAN002050_13455 (CFSAN002050_13455)
Accession : YP_008260602.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2453454 - 2454470 bp
Length : 1017 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; may be involved in regulation; Derived by automated computational analysis using gene prediction method

DNA sequence :
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGG
CCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTTCAATGTTAGCTCTCCATGAGTTACAGGAAACGACGGGGGCAGCGC
TCTATGAGACGATGGAAGAAATAGGAATGGCGCTGAGTGGTAAACTGCGCGAAAGTAATAAATTCACTGATGCTGAGAAA
CTGGAGCGCAGACAGCAGGCTTTGCTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTAC
CGAAGAGAATAGTGATCCTGATTTACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGT
CAAAAAAGAAAAAACGCGATTTGCAATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGT
TTACTGGAACTTGGCGAAGTGGACACCGCTACGTTGTCCTCGCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGA
AATGCCCTTATCGCAGTGGTTCAGACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCAA
TAGCCTTTGAACTTAGCATATGCATCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTG
TTGTTATTCCTTGGCCTTGAAAAAGAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCT
ACTACTCGATATTATTTGTGAGCGCTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGA
AGATGTTCAATCGGTTACTCCAACAACTTGATGCGCAGTTTATGCTGATACCTGATAACTGTTTTAACGACGAAGATCAA
CGTGAACAAATTCTCGAAACGCTTCGTGAAGTAAAGGTAAATCAGGTTTTATTCTGA

Protein sequence :
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALHELQETTGAALYETMEEIGMALSGKLRESNKFTDAEK
LERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRL
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQ
REQILETLREVKVNQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 2e-129 99
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 1e-133 99
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-134 99
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 3e-134 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 2e-129 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13455 YP_008260602.1 type III secretion system protein SsaL VFG0512 Protein 2e-134 99