Gene Information

Name : CFSAN002050_13500 (CFSAN002050_13500)
Accession : YP_008260611.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2461012 - 2461659 bp
Length : 648 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGTCACTTACCTTTCCGATATTACCAATCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGTTGGTT
AGGGTTAGTCACCGGAGAGGTGATTATTGGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGG
CGGGGTTTCTGCTTGATACTTTACGTGGCGCGACAATGGGTACGATATTCAATTCTACAATGGAAGCTGAAACCTCACTT
TTTGGCTTGCTTTTCAGCCAGTTTTTGTGTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAATATTCTGTA
TGAGTCATATCAATATTTACCACCAGGGTGTACTTTATTATTTGACCGGCAATTTTTAAAATATATCCAGGCAGAGTGGA
GAACGCTTTATCAATTATGTGTCAGTTTCTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTT
TTAAATCGGTCGGCACAACAACTGAATGTGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTAGTTCTACTCACGCTCCT
GATCTCATTCCCTTATGCTCTTCATCACTATTTGGTTGAAAGTGATAAGTTTTATATTTATCTGAAAGACTGGTTCCCAT
CTGTATGA

Protein sequence : 
MSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVIIGFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTMEAETSL
FGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPGCTLLFDRQFLKYIQAEWRTLYQLCVSFSLPAIICMVLADLALGL
LNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHHYLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-90 99
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-90 99
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 5e-89 98
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 4e-89 98
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 4e-89 98
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 8e-43 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13500 YP_008260611.1 hypothetical protein VFG0521 Protein 2e-89 98