Gene Information

Name : hpaE (YpsIP31758_2363)
Accession : YP_001401332.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.60
Position : 2662424 - 2663890 bp
Length : 1467 bp
Strand : -
Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR02299

DNA sequence :
ATGAAGATCGTTAACCATTGGATTGATGGGAAAAATATTACCAGTAAGGACTATTTCACAACAATCAACCCGGCCACTGG
CGAGGTGCTGGCTGACGTGGCAAGCGGGGGGATAAAAGAGATCAACCAAGCCGTTGCTGCCGCGAAAAGTGCTTTCCCTC
ACTGGGCTAACCTGCCGATGAAAGTGCGTGCCCGTCTAATGCGCCGTCTGGGGGAGTTGATTGAGCAACAGATCCCAGAA
ATAGCGCAGATGGAAACGCAGGATACCGGCCTGCCCATTTATCAAACGCAAAATGCCTTGATCCCGCGGGCAGCACATAA
CTTCGAATTTTTTGCCGAAATTTGTCAGCAAATGAATGGCCAGACGTATCCGGTTGACGATCAAATGTTGAATTACACCT
TGGTGCAACCCGTGGGAGTGTGTGCGTTGGTCTCCCCTTGGAATGTCCCTTTTATGACGGCGACCTGGAAGGTCGCGCCT
TGTTTGGCGCTGGGTAACACCGCGATATTGAAAATGTCGGAGCTATCGCCACTGACCGCAGACAAACTGGGTGAACTGGC
CTTAGAGGCGGGTATACCGGCGGGGGTTCTCAACGTGGTACAAGGATATGGGGCCACTGTCGGTGATGCATTGGTATGTC
ATCAGGATGTCCGAGCTATCTCTTTTACCGGCGGCACCGCGACGGGAAACCGCATCATGCAACGTGCCGGGTTGAAAAAA
TACTCCATGGAACTCGGTGGTAAATCTCCGGTACTTATCTTCGACGATGCTGATATCGAACGGGCTATGGATGCGGCGCT
ATTTTCCATCTTCTCTCTCAATGGTGAACGTTGCACGGCGGGTTCGCGCATTTTTATTCAAGAGAGTCTCTATTCGGCAT
TTATTCAACGTTTTGCTGAGCGGGCCAGCCGTTTACGTGTGGGGGACCCACAAGATCTCGACACTCAAGTTGGCGCATTG
ATCAATAAACCGCATTGGGACAAAGTTTCCGGCTATATCCAGTTGGGGATAGAGGAGGGGGCCACGTTGTTGGCAGGGGG
GCCGGATAAACCCATCGACCTACCTGCTCATCTGCGCGGAGGGCACTTCCTGCGTCCAACGGTGTTGGCCGATGTTGATA
ACCGAATGCGGGTTGCTCAGGAAGAGATTTTTGGACCGGTCGCTTGCCTGATCCCCTTTAAGAATGAAGACGCCGGACTG
CGTTTGGCAAACAGCGTGCCATACGGTCTGGCTGCTTATATCTGGACACAAGACGTCAGCAAAGTGCTGCGTTTGGCCCG
AAGTATTGAAGCCGGCATGGTGTTCGTGAATACCCAGAATGTGCGGGATCTCCGCCAGCCATTTGGCGGCATCAAGGCAT
CGGGAACCGGGCGCGAAGGGGGAAAGTACAGTTTTGATGTTTTTGCTGAAGTGAAAAACGTCTGTATTTCCATGGGGGAG
CATCCGATCCCCCGTTGGGGGATGTAA

Protein sequence :
MKIVNHWIDGKNITSKDYFTTINPATGEVLADVASGGIKEINQAVAAAKSAFPHWANLPMKVRARLMRRLGELIEQQIPE
IAQMETQDTGLPIYQTQNALIPRAAHNFEFFAEICQQMNGQTYPVDDQMLNYTLVQPVGVCALVSPWNVPFMTATWKVAP
CLALGNTAILKMSELSPLTADKLGELALEAGIPAGVLNVVQGYGATVGDALVCHQDVRAISFTGGTATGNRIMQRAGLKK
YSMELGGKSPVLIFDDADIERAMDAALFSIFSLNGERCTAGSRIFIQESLYSAFIQRFAERASRLRVGDPQDLDTQVGAL
INKPHWDKVSGYIQLGIEEGATLLAGGPDKPIDLPAHLRGGHFLRPTVLADVDNRMRVAQEEIFGPVACLIPFKNEDAGL
RLANSVPYGLAAYIWTQDVSKVLRLARSIEAGMVFVNTQNVRDLRQPFGGIKASGTGREGGKYSFDVFAEVKNVCISMGE
HPIPRWGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 0.0 85
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-75 42