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Name : SEEB0189_12430 (SEEB0189_12430) Accession : YP_008308801.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaT Function : - COG functional category : - COG ID : - EC number : - Position : 2529097 - 2529876 bp Length : 780 bp Strand : - Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTAAGCCTTTCTTTATTACTTCC CCTATTAAAAAGTGGCAGTTTAGGGGCCGCTCTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGTTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGCTT CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA Protein sequence : MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH YLVESDKFYIYLKDWFPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-98 | 99 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 2e-98 | 99 |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 2e-98 | 99 |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 1e-98 | 99 |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 1e-98 | 99 |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 5e-45 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEB0189_12430 | YP_008308801.1 | type III secretion system protein SsaT | VFG0521 | Protein | 8e-99 | 99 |
