Gene Information

Name : yedV (c2386)
Accession : NP_754278.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : sensor-like histidine kinase yedV
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0642
EC number : 2.7.3.-
Position : 2188432 - 2189790 bp
Length : 1359 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b1968; Escherichia coli O157:H7 ortholog: z3060

DNA sequence :
ATGAAAAGATTATCTATAACCGTCCGTTTAACCTTGCTTTTTATATTGCTGCTGTCTGTTGCTGGCGCTGGAATTGTATG
GACTCTCTATAATGGCCTGGCAAGTGAGTTGAAATGGCGCGATGATACAACACTCATTAACCGGACAGCGCAGATCAAGC
AGTTGTTAATTGATGGGGTAAATCCAGATACGTTACCTGTGTACTTTAACCGGATGATGGATGTTAGTCAGGATATTTTG
ATCATTCATGGTGATGGCATCAATAAAATTGTTAACCGGACAAATGTCAGTGATGACATGTTAAATAACATACCTGCTAG
TGAGACAATCAGCGCAGCAGGCATTTACAGAAGCATTATTAATGATACAGAGATAGATGCTTTACGAATTAACATTGATG
AAGTTTCGCCATCATTAACGGTTACTGTGGCTAAATTGGCTTCAGCCAGACATAATATGCTTGAACAGTATAAAATTAAT
AGCATTATAATTTGCATTGTCGCCATTATATTGTGCTCAGTATTAAGTCCGTTGTTAATCAGGACGGGGTTGCGAGAGAT
CAAAAAGTTGAGTGGCGTAACGGAAGCGCTGAATTATAACGATAGCCGAGTGCCGGTTGAGGTTAGCGCATTACCGAGAG
AACTAAAACCTCTTGGGCAGGCGTTGAATAAAATGCATCATGCTTTAGTCAAAGATTTTGAGCGCCTTAGTCAATTTGCT
GACGATCTCGCTCATGAACTTAGAACGCCAATTAATGCATTACTGGGTCAGAATCAGGTTACGCTCAGTCAAATCAGAAG
TATCGCTGAATATCAAAAAACAATTGCCGGAAACATTGAAGAGCTGGAAAATATTTCGCGGTTAACAGAGAATATACTGT
TTCTTGCCAGGGCAGACAAAAACAATGTTTTGGTGAAACTGGATGCGCTTTCTCTCAATAAGGAAGTTGAAAATCTTTTG
GACTATCTTGAATATCTTTCAGACGAGAAAGAGATTCGTTTTAAGGTCGAGTGCAATCAACAAATCTTTGCGGATAAAAT
TTTACTGCAACGAATGTTATCGAATCTTATTGTTAACGCCATTCGATATTCACCAGAAAAATCGCGTATTCATATAACCA
GTTTTCTTGATGCCAACGGTTCTCTTAATATTGATATCGCCAGTCCTGGAACGAAAATTAATGAGCCTGAAAAACTCTTC
CGTAGATTTTGGCGGGGAGATAATTCGCGTCATTCCGTAGGTCAGGGACTTGGCCTTTCTTTAGTCAAAGCGATTGCCGA
ATTACATGGAGGAAGTGCTACGTATCACTATCTCAGTAAGCATAACGTGTTCCGAATTACGTTACCGCAAAGAAATTAA

Protein sequence :
MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDIL
IIHGDGINKIVNRTNVSDDMLNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
SIIICIVAIILCSVLSPLLIRTGLREIKKLSGVTEALNYNDSRVPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFA
DDLAHELRTPINALLGQNQVTLSQIRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDALSLNKEVENLL
DYLEYLSDEKEIRFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDANGSLNIDIASPGTKINEPEKLF
RRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLSKHNVFRITLPQRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copS NP_460068.1 copper resistance protein Not tested SPI-5 Protein 6e-109 55
copS AAC33720.1 histidine kinase Not tested SPI-5 Protein 8e-106 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yedV NP_754278.1 sensor-like histidine kinase yedV VFG0595 Protein 3e-109 55