Gene Information

Name : tcfA (SPA2455)
Accession : YP_151646.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Unknown
Product : fimbrial protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2553364 - 2554074 bp
Length : 711 bp
Strand : -
Note : similar to Salmonella typhi Ty2 putative fimbrial protein

DNA sequence :
ATGAATTTTAAAGATACTCTTCCCGGGGTGTTTCTCTGTGTCGCTATGTTTGCATGTGGTCATGCCAGGGCGAATATGCT
CGTTTATCCCATGGCGGCAGAAATTAATAGTAGCCGCGAAGAGGCCACCTCGCTGTTCGTCTATTCTAAATCAGATCATG
TGCAATATATTCGAACAAGAATCATGCGTATTGAACACCCGGGTATGCCACAGGAGAAGGAGGTACCAGCAGGGAATGAT
ATAGAGACAGGACTTGTTGTCTCCCCGGAGAAATTTGCCCTTTCCCCGGGAACAAAAAAAACAATACGTGTTATCAGTAC
TCAGGCACCGGAAAGAGAGGAAGCCTGGCGAGTATACTTCGAGGCTGTTCCTGAACTGGAAGATGATCCACAGGCAGGCG
GAAAGCAAAATTCATCCGTAAGTGTGAATCTTGTCTGGGGGGGGTTGCTGCGTGTTTCTCCGTCAGACCCCAGGCCTGCG
CTGGTAACGAACGGTCACCACCTGCTGAATACGGGAAATACCCGGCTTTCTCTTATTCGGGCCGGCAACTGCGACACCAC
ATGCCACTGGCAGAATATAGACAAAAGTATTTATCCAGGCGGGAGTGCTGATATTCCGGCCGGAATAAAAAGTAATGCAT
TTCGTGTGGAATATCGTACGGGTGCAAATTCACCGGTAATCTCTGCTGATTTAACAGCAGCCGGAAAGTAA

Protein sequence :
MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSLFVYSKSDHVQYIRTRIMRIEHPGMPQEKEVPAGND
IETGLVVSPEKFALSPGTKKTIRVISTQAPEREEAWRVYFEAVPELEDDPQAGGKQNSSVSVNLVWGGLLRVSPSDPRPA
LVTNGHHLLNTGNTRLSLIRAGNCDTTCHWQNIDKSIYPGGSADIPAGIKSNAFRVEYRTGANSPVISADLTAAGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcfA NP_454912.1 putative fimbrial protein Not tested SPI-6 Protein 2e-108 99