Gene Information

Name : YpAngola_A2480 (YpAngola_A2480)
Accession : YP_001606897.1
Strain : Yersinia pestis Angola
Genome accession: NC_010159
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2595408 - 2596100 bp
Length : 693 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR01387

DNA sequence :
ATGCGGCTATTGTTGGTAGAAGATGAGGAGAAGACATCTTCGTATATCAATCGCGCCCTCAGCGAGTTGGGCTTTACCGT
CGATGTAGCGGCCACCGGGATCGACGGATTATATCTGGCTCTTGAGTATGATTACGATACGATTGTGCTCGATGTCATGT
TGCCCGGCATGGATGGTTACAGCGTTCTCGAAGGCCTACGCGCCAGCAAACAAACTCCGGTTCTGATGTTATCCGCCCGT
GGCTCGGTTGATGAACGAGTTAAGGGCCTGCGTCACGGTGCCGACGATTATTTGCCTAAGCCTTTTTCGCTGATTGAACT
GGTTGCGCGTATCCAGGCGTTGTTGAGGCGGCGTCCCAGGGATGGTGTAGATGTCAGCCAATTGCACATTAATGATCTAC
ATCTCGACCTGCTGGCAAGGCGTGTCACGCGAGCCGGTGAACGTCTTGAACTCACCGCCAAAGAGTTCGCCCTGTTAAGC
CTGTTAGCCAGACATCAGGGGGAAATTCTGTCAAAAATGATGATTGCAGAGCAGGTCTGGGACATGAATTTTGACAGCGA
TGCTAATGTCGTTGAGGTGGCGATAAAACGCCTGCGGGCGAAAATAGATACGCCCTACCCGGTCAAACTGCTGCATACAG
TGCGAGGCATGGGGTATGTCCTTGAAACTCGCCCCGATCGCCAGACTAAATAG

Protein sequence :
MRLLLVEDEEKTSSYINRALSELGFTVDVAATGIDGLYLALEYDYDTIVLDVMLPGMDGYSVLEGLRASKQTPVLMLSAR
GSVDERVKGLRHGADDYLPKPFSLIELVARIQALLRRRPRDGVDVSQLHINDLHLDLLARRVTRAGERLELTAKEFALLS
LLARHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRAKIDTPYPVKLLHTVRGMGYVLETRPDRQTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-53 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-52 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0083 Protein 4e-62 61
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0197 Protein 2e-59 58
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0638 Protein 2e-52 57
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0125 Protein 2e-60 55
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0111 Protein 3e-59 53
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0347 Protein 2e-52 51
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator BAC0308 Protein 6e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator VFG0596 Protein 6e-54 50
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator VFG1389 Protein 5e-38 47
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator VFG1390 Protein 6e-40 44
YpAngola_A2480 YP_001606897.1 DNA-binding heavy metal response regulator VFG1386 Protein 2e-35 43