Gene Information

Name : SSON53_01245 (SSON53_01245)
Accession : YP_005454832.1
Strain : Shigella sonnei 53G
Genome accession: NC_016822
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 263552 - 264883 bp
Length : 1332 bp
Strand : -
Note : COG3522 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGGCAACCACCCGCAACAAGGTGATGTGGCAGGAAGGGATGCTGATGCGTCCACACCATTTCCAGCAGCAGCAGCGTTA
CAACGACTACCTGGATAACCAGCGTTTCCGGGCCATGAATGATTTATCCTGGGGATTTACCGAACTCACCCTCAACAATG
AACTGCTGGCGCAGGGTAAGATCATGATTGACAGCGCGTCAGGCACACTGCCCGACGGCACCGTCTTTTCTATCCCCGAC
CAGGACGCACTGCCCGATCCGCTGCACCCGCAAAATTTTCCGGACGAAAGAAGCCGCAATATCTACCTCGCTCTGCCGGT
CGCCAGTGATGTGAGAAATGAAATCAGCGACGGACGGCGAATCGGGCGTTACCGGCTGAATTATGCCGATGTCCGGGATT
TGCATTCAGAAGAAGGTGACGCGCGAACATTGACGCTGGGTCAACTGACGCCGCGCATTATGAGCGGTGCAGAAGATATG
AGCGCCTATATTACGCTCCCGCTTTGCCGTATCAGCGATCGCCATGCCGATGGCTCCCTGACGTTGGATGACGATTTTAT
CCCCTCCTGCCAGAATATTCAGGTCAGTAAGAAACTGCGTGTTTATCTCAAAGAGGTACAGGGGGCCATTGGCGGACGGG
CAAGCGATCTGGCAAACCGTATTGGCTCTCCGGCGCAGAGCGGCATCGCGGATGTGGCGGAATTTATGATGTTGCAGTTA
CTTAACCGTAACCAGACCCGGTTTACCCATCACGCCCGTCGATCCCAGCTCCACCCGGAAGATTTCTACCTTGATCTTGC
CGGGTTGCTGGGTGAACTGATGACCTTTACCGAGCCGTCGCGCCTGCCCTGCCCGCTTGATGTGTATGATCATCATGACC
TGACCAAAATATTTAAAACGCTGTTACCGGAAGTCAAACGGGCGCTGCATACCGTACTGTCGCCAAGAGCCGTCAATCTG
CCGCTGCATCTGCGTGACGGTATCTGGCAGGCCGATATCCATGACACAGAACTGCTGCAATCTGCCACCTTTGTGCTGGC
CGTGGCGGCAAATATGCCGGTCGATCAGATCCAGCGCCAGTTTATCCAGCAGTCGAAAATTTCCTCGCCGGAAAAAATCC
GCAATATGGTCAGTGTGCAGATCCCCTGTATTCCATTGCGTGCCCTTATGGTGGCTCCCCGCCAGCTTCCTTACCATTCC
GGGTTCAGCTATTTCGAACTCGACAAGAGTGGCCAGGCCTGGACAGAAATGGCTGCCGCCGGGGCCGTTGCACTGCATGT
TTCCGGCAGTTTCCCGGATCTGAACATGCAACTGTGGGCGATAAGAGGGTAA

Protein sequence :
MATTRNKVMWQEGMLMRPHHFQQQQRYNDYLDNQRFRAMNDLSWGFTELTLNNELLAQGKIMIDSASGTLPDGTVFSIPD
QDALPDPLHPQNFPDERSRNIYLALPVASDVRNEISDGRRIGRYRLNYADVRDLHSEEGDARTLTLGQLTPRIMSGAEDM
SAYITLPLCRISDRHADGSLTLDDDFIPSCQNIQVSKKLRVYLKEVQGAIGGRASDLANRIGSPAQSGIADVAEFMMLQL
LNRNQTRFTHHARRSQLHPEDFYLDLAGLLGELMTFTEPSRLPCPLDVYDHHDLTKIFKTLLPEVKRALHTVLSPRAVNL
PLHLRDGIWQADIHDTELLQSATFVLAVAANMPVDQIQRQFIQQSKISSPEKIRNMVSVQIPCIPLRALMVAPRQLPYHS
GFSYFELDKSGQAWTEMAAAGAVALHVSGSFPDLNMQLWAIRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 2e-136 62
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-136 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSON53_01245 YP_005454832.1 hypothetical protein VFG2082 Protein 6e-92 44