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Name : SN31241_24700 (SN31241_24700) Accession : YP_008360386.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : Secreted effector protein SseC Function : - COG functional category : - COG ID : - EC number : - Position : 2509386 - 2510723 bp Length : 1338 bp Strand : + Note : pathogenicity island 2 effector protein SseC PRK15362; Secreted effector protein SseC of Salmonella enterica UniRef RepID=SSEC_SALTY DNA sequence : GTGAATTCTACTTTTGGCGATGGCAACGCCGCGTGCCTGTTATCAGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTT GAAGCAACTGCTTGATGCCGTACCCGGAAATCATAAGCGTCCATCATTGCCTGACTTTTTGCAGACCAATCCCGCGGTTT TATCAATGTTGATGACGACATTAATACTCAGCGTTTTTGGTAATAACGCTCAATCGTTATGCCAACAGCTTGAGCGGGCA ACTGAGGTGCAAAATGCATTACGTGATAAGCAGGTAAAGGAGTATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGA TAAAGCGCGTAAAGCGGGCATTTTTGGCGCTATTTTTGACTGGATTACCGGCATATTTGAAACTGTGATTGGCGCCTTAA AAGTTGTGGAGGGTTTTCTGTCCGGTAATCCCGCAGAAATGGCTAGCGGCGTAGCTTATATAGCCGCAGGTTGTGCAGGA ATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTGACCACGATACCTGTCAGGCAATTATTGACGTGACAAG TAAGATTCAATTTGGTTGTGAAGCCGTCGCGCTGGCACTGGATGTTTTCCAGATTGGCCGTGCTTTTATGGCGACGAGAG GTTTATCTGGCGCAGCTGCAAAAGTGCTTGACTCCGGTTTTGGCGAGGAAGTGGTTGAGCGTATGGTAGGTGCAGGGGAA GCAGAAATAGAGGAGTTGGCTGAAAAGTTTGGCGAAGAAGTGAGCGAAAGTTTTTCCAAACAATTTGAGCCGCTTGAACG TGAAATGGCTATGGCGAATGAGATGGCAGAGGAGGCTGCCGAGTTTTCTCGTAACGTAGAAAATAATATGACGCGAAGCG CGGGAAAAAGCTTTACGAAAGAGGGGGTGAAAGCCATGGCAAAAGAAGCGGCAAAAGAAGCCCTGGAAAAATGTGTGCAA GAAGGTGGAAAGTTCCTGTTAAAAAAATTCCGTAATAAAGTTCTCTTCAATATGTTCAAAAAAATCCTGTATGCCTTACT GAGGGATTGTTCATTTAAAGGCTTACAGGCTATCAGATGTGCAACCGAGGGCGCCAGTCAGATGAATACTGGCATGGTTA ACACAGAAAAAGCGAAGATCGAAAAGAAAATAGAGCAATTAATAACTCAGCAACGGTTTCTGGATTTCATAATGCAACAA ACAGAAAACCAGAAAAAGATAGAACAAAAACGCTTAGAGGAGCTTTATAAGGGGAGCGGTGCCGCGCTTAGAGATGTATT AGATACCATTGATCACTATAGTAGCGTTCAGGCGAGAATAGCTGGCTATCGCGCTTAA Protein sequence : MNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRPSLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERA TEVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDWITGIFETVIGALKVVEGFLSGNPAEMASGVAYIAAGCAG MVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALDVFQIGRAFMATRGLSGAAAKVLDSGFGEEVVERMVGAGE AEIEELAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAEFSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQ EGGKFLLKKFRNKVLFNMFKKILYALLRDCSFKGLQAIRCATEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQ TENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIAGYRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sseC | NP_460365.1 | translocation machinery component | Virulence | SPI-2 | Protein | 3e-177 | 99 |
| sseC | CAA12187.1 | SseC | Virulence | SPI-2 | Protein | 3e-177 | 99 |
| sseC | AAC28881.1 | SseC | Virulence | SPI-2 | Protein | 2e-177 | 99 |
| sseC | YP_216408.1 | secretion system effector protein SseC | Virulence | SPI-2 | Protein | 1e-172 | 97 |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | Virulence | SPI-2 | Protein | 3e-173 | 94 |
| sseC | NP_805071.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 3e-173 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_24700 | YP_008360386.1 | Secreted effector protein SseC | VFG0501 | Protein | 1e-177 | 99 |
