Gene Information

Name : sinR (t2554)
Accession : NP_806276.1
Strain : Salmonella enterica Ty2
Genome accession: NC_004631
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2631487 - 2632431 bp
Length : 945 bp
Strand : -
Note : corresponds to STY0341 from Accession AL513382: Salmonella typhi CT18

DNA sequence :
ATGGAACTGATCAATAATCGTGGTATGCGAGATTGGATGATATTTATTAAAGTGGCGGAAGTAGGGAATCTTTCCCGGGC
TGCGCGGGAATTAGATATTAGCATTTCTGCTGTCAGTAAATCGCTTAGTCGCCTTGAGAATTCTATTGAGGTTACTTTAC
TTCGGCGCGATTCACATCACTTAGAGCTGACTGGAGCTGGTCAGACAGCCTATGCAAGCATGAAAAGGATAACATCTTCC
TTTCAGTCCTTGCTGGATGAATTGCGAAATCCGGATAAAATTATCAGAGGGAGTATAAAATTTTCGGCTCCGGCTATTGT
CTGTGAGTTTCTTGCCAATAAGTGGATATGGGAATTTACAGCTAGCTATCCGGATACAAAAATCTACCTGGATTCACGAG
AGCGTAGCGATTTTTTTAGTAAATCCCTGGAGTTTGATGAGCTGGTTTTTAAAAGTGGCATAATCGAAAGTGAGGATCTC
GTGTATCGAAAGATAAGCCCTTTAAAGTTGGTTCTTTGTGCAAGTCCGAAATATATCAGAAAATATGGCAGGATCTCACA
TCCTGGCGATTTGGAAAATCACATTATTGTGGGTCTTCACAACCATGGTCTTTCCGGACCTCTTACTCTTTTCCGTCAAG
AGGAATCATACACTATTAGTGGCGCTGTTAATGTTCATTTATCTTCCAATAATCTTTTGAGTGTTCTTAATTTGGTTTTA
GAAGGGAAGGGTATCAACCTCATGACTCCGGCCTGGCTTGCCACTAAATACTTAAAAAATAATGAACTTGAAATTATACT
TCCTGAATGGAGAGTTCCAGATCTCCCCATTTATCTTGTATGGCGTCATCGTCAGTATTATTCTCCTTTATTTCAACGCT
TTCTGTCTTTTATTGAAGATAAATGGAATAATCGCCCACAAATTGATTTTCTGAATGATGATTAA

Protein sequence :
MELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIEVTLLRRDSHHLELTGAGQTAYASMKRITSS
FQSLLDELRNPDKIIRGSIKFSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESEDL
VYRKISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQEESYTISGAVNVHLSSNNLLSVLNLVL
EGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sinR NP_454910.1 LysR-family transcriptional regulator SinR Not tested SPI-6 Protein 1e-134 100