Gene Information

Name : gabD (SG2697)
Accession : YP_002227543.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 2815907 - 2817355 bp
Length : 1449 bp
Strand : +
Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent

DNA sequence :
ATGCAACTTAACGACTCTACCCTGTTCCGCCAGCAGGCCTTTATCGATGGCGACTGGCGCGACGCGCGCGGCGGCGATGT
CATCCCCATGAGCAACCCCGCCAACGGGAAACCGCTCGGCAATGTGCCCAAAATGGGGGCGGAAGAGACGCGCGACGCCA
TCAACGCCGCCAATCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAGCGAGCCAATATCCTGCGTCGCTGGTTC
AATCTGATAATGGAACATCAGGACGATTTGGCGCATCTGATGACGCTGGAACAGGGTAAACCGCTGGCGGAAGCGAAAGG
CGAAATTAGCTACGCCGCCTCGTTTATTGAATGGTTCGCCGAAGAGGGGAAGCGTATCTATGGCGACACGATTCCAGGTC
ATCAGGCCGATAAACGGCTGCTGGTGATTAAACAGCCCATCGGCGTCACCGCCGCGATTACCCCGTGGAACTTTCCCTCA
GCAATGATCACCCGTAAAGCCGGCCCCGCGCTGGCCGCAGGCTGCACGATGGTACTCAAACCCGCCAGCCAGACGCCGTT
TTCCGCGCTGGCGCTGGCGGAACTGGCCCGGCGCGCCGGAATTCCCGCAGGTGTATTTAACGTCGTTACCGGTTCGGCAG
GCGATATCGGCGGCGAGCTGACCAGCAACCCGCTGGTACGCAAACTGTCGTTTACCGGCTCGACGGAGATTGGCCGCCAG
CTAATGGAACAATGCGCCAAAGACATTAAAAAAGTGTCGCTGGAATTGGGCGGCAATGCGCCGTTTATCGTCTTTGACGA
TGCCGATCTGGATAAAGCCGTCGAAGGCGCGCTGGCTTCGAAGTTTCGCAACGCCGGGCAGACCTGTGTCTGCGCCAATA
GATTGTATGTTCAGGACGGCGTTTACGATCGTTTTGCGGAAAAACTCAACCAGGCGGTAAATAAGCTCGCGGTCGGCGAC
GGCCTGCAAGCCGACGTCGCTATCGGGCCGCTGATTGATGAAAAAGCCGTGGCGAAAGTCCAGGAGCATATCGCCGACGC
GCTGGAAAAAGGCGCCCGCGTCATTACGGGCGGTGAAGCGCACAAATTGGGCGGCAACTTCTTTCAACCGACCATTCTGG
CGGATGTTCCTGATAACGCGAAAGTCGCCAAAGAAGAGACATTCGGGCCGCTCGCGCCTCTGTTCCGCTTCAGCGACGAG
GCGGATGTCATCAGACAGGCTAACGATACCGAGTTCGGCCTGGCAGCCTATTTTTATGCACGCGATTTAAGCCGCGTTTT
CCGCGTCGGCGAAGCGCTGGAATACGGCATCGTCGGTATTAATACCGGCATTATCTCCAACGAAGTCGCGCCTTTCGGCG
GTATTAAGGCCTCCGGATTAGGCCGTGAAGGTTCCAAATACGGCATCGAAGATTATTTAGAAATCAAATATATGTGCATC
GGCCTTTAA

Protein sequence :
MQLNDSTLFRQQAFIDGDWRDARGGDVIPMSNPANGKPLGNVPKMGAEETRDAINAANRALPAWRALTAKERANILRRWF
NLIMEHQDDLAHLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPS
AMITRKAGPALAAGCTMVLKPASQTPFSALALAELARRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLNQAVNKLAVGD
GLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDE
ADVIRQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-158 67
hpaE AAO17179.1 HpaE Not tested tcd island Protein 8e-71 41