Gene Information

Name : Noc_2605 (Noc_2605)
Accession : YP_344588.1
Strain : Nitrosococcus oceani ATCC 19707
Genome accession: NC_007484
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2958648 - 2960132 bp
Length : 1485 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGTCATCCCCATTGCCCCTCACCCACAAAGCGCAGGTAGAGGTACGCCAAACGCGCTTGCTGATTGATGGCAA
ATTTTGCGACAGCCTCAGCGGTAAGACCTTTGCCACCATCGATCCCGCTACTGAAGAAGTCATTGCCCAGGTGGCGGAGG
GCGATGCGGAAGATATTGACCTGGCGGTTCAAGCAGCCCGCAAAGCTTTCGATAGCGGCCCCTGGCATCGGATGGACGCA
CGGGAACGGGGCCGCCGAATGTTGAAGTGGGCCGATTTGATTGAAGCTCATATGGAAGAGCTAGCTAAACTTGAAGTCTT
GGACAATGGGAAACCCATCAACGAGGCCCTAGGCTACGATATTCCCAGCGCCGCGGCTACGCTTCGTTATTTTGCCGGCT
GGGCGGATAAAATCCATGGTAAAACCATTCCTATTTCCGGGCCTTTCTTCACTTATACGCGCCGGGAGCCGGTGGGGGTT
TGCGGGCTCATCATTCCCTGGAATTTTCCTCTGGCAATGGCGGCTTGGAAGTTAGGCCCTGCCCTAGCCACCGGCTGCAC
CGCTATTCTAAAGCCGGCGGAACAAACTCCCCTGACGGCCCTTCGTGCCGGTGAGTTGGCCCTGGAGGCAGGTATTCCCC
CGGGAGTCCTCAATATCGTGCCCGGTTTTGGCCCTACGGCGGGCGCAGCCCTGGTACAGCACCCTCTGGTTGAGAAAATC
GCCTTCACGGGAGAATATAAAACCGCCCAAACGATTAAGCAGGCCACAGTCAACAGCATGAAACGCCTGTCCTTTGAGCT
GGGAGGTAAAAGCCCTAACATCATCTTTAATGATGCTAATCTCGAAGAAGCTATTACGGGTTCCTTTGGGGCTATTTTTC
TAAATCAAGGACAAAATTGTTGTGCGGGTAGCCGCGCCTTTGTACAAAACAATATTTATGATGAATTCGTGGAGCAATTT
GCCGAGAAGGCAGCCAAGCGTAAACTGGGCGATCCCTTCGATCCCGCTACCGAGCATGGAGCCCAGATCGACAAGGCCCA
GTTCGATAAAATCATGCACTATATCGCCCTTGGCAAGGAGCAAGGCGCGGAATGTGTCACCGGCGGCGAGCGGGCCTTTG
AGCGAGGTTATTTTATCCAACCCACCATCTTCAAGGAAGTCAATGAAAATATGGCCATCGCAACGGACGAGATTTTTGGG
CCAGTGGCTAGTGTGCTACGCTTCAAGAACATTAATGAGGTCATTGAAAAAGCCAATAACACCCCGTTTGGCCTCGCGGC
GGCCGTATGGACCCAAGATATCGACAAAGCCAACGCGGTAGCCGCAGGGGTAAAAGCGGGAACCGTCTGGGTCAACTGCT
ACAATATTGTCGATCCAGCGGCGCCTTTTGGCGGCTTTAAACTATCCGGGCTCGGCCGGGAACTAGGCGAACAAGCCCTG
GATGCCTACACGGAAACCAAAACGGTCACTGTATTGCGGAGGTAA

Protein sequence :
MSQSSPLPLTHKAQVEVRQTRLLIDGKFCDSLSGKTFATIDPATEEVIAQVAEGDAEDIDLAVQAARKAFDSGPWHRMDA
RERGRRMLKWADLIEAHMEELAKLEVLDNGKPINEALGYDIPSAAATLRYFAGWADKIHGKTIPISGPFFTYTRREPVGV
CGLIIPWNFPLAMAAWKLGPALATGCTAILKPAEQTPLTALRAGELALEAGIPPGVLNIVPGFGPTAGAALVQHPLVEKI
AFTGEYKTAQTIKQATVNSMKRLSFELGGKSPNIIFNDANLEEAITGSFGAIFLNQGQNCCAGSRAFVQNNIYDEFVEQF
AEKAAKRKLGDPFDPATEHGAQIDKAQFDKIMHYIALGKEQGAECVTGGERAFERGYFIQPTIFKEVNENMAIATDEIFG
PVASVLRFKNINEVIEKANNTPFGLAAAVWTQDIDKANAVAAGVKAGTVWVNCYNIVDPAAPFGGFKLSGLGRELGEQAL
DAYTETKTVTVLRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-79 45
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-74 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-80 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-80 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-80 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-80 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-80 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Noc_2605 YP_344588.1 aldehyde dehydrogenase VFG0082 Protein 1e-80 43