Gene Information

Name : iagB (CV_2641)
Accession : NP_902311.1
Strain : Chromobacterium violaceum ATCC 12472
Genome accession: NC_005085
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 2851719 - 2852174 bp
Length : 456 bp
Strand : +
Note : identified by sequence similarity; ORF located using GeneMark/Blastx/COG0741

DNA sequence :
ATGCGCGCCGCCTTGCTCGCCGCCCTGCTGCTGGCCTCGCCGCTGGCTCGCGCCGATTGCTGGGACTACGCCGGGACGAT
GTTCAACATCTCGCCGGACCTGCTGTACGCGATCGCACAGCAAGAGTCCGGCATGAAGCCGGACGCCATAGGCCGCAACC
GCGACGGCAGCCGGGACCTGGGGCTGATGCAGATCAACAGCGCCCATCTGCCGCGGCTGCGCCAGCTAGGCGTGAACGAG
CGGCAGTTGCTGGAGAGCCCCTGCCTGTCGGTCGTGGTGGGCGCCTCCATCCTGTCCGACATGATGAAACGCTACGGCTA
CTCCTGGGAAGCCGTCGGCGCCTACAACGCCGGCCTGTCGCCGAACCGGCACGCGCTGCGCATGCGCTACGCGCGACAGG
TCTGGCAGCGCTATCAGAAACTGCAGGCGCCCGAAAGCGCCCGCCAGCAACCCTAG

Protein sequence :
MRAALLAALLLASPLARADCWDYAGTMFNISPDLLYAIAQQESGMKPDAIGRNRDGSRDLGLMQINSAHLPRLRQLGVNE
RQLLESPCLSVVVGASILSDMMKRYGYSWEAVGAYNAGLSPNRHALRMRYARQVWQRYQKLQAPESARQQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 6e-41 69
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 6e-41 69
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 1e-40 68
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 1e-40 68
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 3e-13 44
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 3e-13 44
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 8e-13 43
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 3e-13 43
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 5e-13 43
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 2e-12 43
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 4e-18 41
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 6e-18 41
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 6e-18 41
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 5e-18 41
unnamed AAK26704.1 unknown Not tested LEE Protein 3e-18 41
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 5e-18 41
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 4e-18 41
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 9e-18 41
unnamed AAC31524.1 L0045 Not tested LEE Protein 4e-18 41
pilT AAC98888.1 PilT Virulence SPI-7 Protein 1e-19 41
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 2e-19 41
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 2e-19 41
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-18 41
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-18 41
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iagB NP_902311.1 cell invasion protein VFG0539 Protein 2e-41 69
iagB NP_902311.1 cell invasion protein VFG0994 Protein 4e-25 47
iagB NP_902311.1 cell invasion protein VFG0823 Protein 2e-18 41
iagB NP_902311.1 cell invasion protein VFG0719 Protein 4e-18 41