Gene Information

Name : SPUCDC_2690 (SPUCDC_2690)
Accession : YP_008482283.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2702206 - 2703024 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCGCTTAGCCAGCCGCTTTGGACGGATTAACCAGATACGCCGCGACCGTCCCTTAACCCGTGAAGAATTAATACAGGT
GGTCCCCAGCGTTTTTGGTGAGGACAAACATGCGTCCCGCAGTGAACGCTACACCTGCATACCGACCATCACCATCCTGG
AAAACCTTCAACGGGAAGGGTTCCAGCCGTTCTTCGCTTGTCAGTCACGGGTTCGTGACCCTGCTCGTCGGGAATATACG
AAGCACATGCTCCGCCTGCGTCGCACCGGTCAGATACACGGTCAGCAGGTGCCGGAAATCATCATCCTGAATTCGCACAG
TGGTGAGTCCAGTTTTCAGTTATTGCCGGGAATTTTCCGCAGCGTATGCACGAATTCGCTCGTCTGCGGGCAGTCCTTTG
GCGAAATCAGAGTTCCGCACCGGGGCGATGTCGTTAACAAGGTCATTGAGGGAGCCTACGACGTACTCAGCGTCTTTGAC
CGGATGGAAGAGAAGCGCGACGCCATGCAGTCACTTTTATTACCGCCACTGGCACAGCATGCACTGGCGAATGCTGCCCT
GACGTACCGTTTTGGTGAAGAGCATCAGCCGGTGACGGCAACGCAGATACTGACACCCCGACGTTATGAAGACCGCAGTG
ATGACCTGTGGACAACGTACCAGCGTATCCAGGAGAACTTGCTGAAAGGCGGGCTTCCGGGACGTACTGCGAAGGGCAAA
CGCAGCCATACCCGAGCCGTTAACGGCATTGACGGGGACATCAGGCTAAACCGTGCCCTGTGGGTGATGGCGGAACAGAT
GCAGCAGGCGCTGAGTTGA

Protein sequence :
MRLASRFGRINQIRRDRPLTREELIQVVPSVFGEDKHASRSERYTCIPTITILENLQREGFQPFFACQSRVRDPARREYT
KHMLRLRRTGQIHGQQVPEIIILNSHSGESSFQLLPGIFRSVCTNSLVCGQSFGEIRVPHRGDVVNKVIEGAYDVLSVFD
RMEEKRDAMQSLLLPPLAQHALANAALTYRFGEEHQPVTATQILTPRRYEDRSDDLWTTYQRIQENLLKGGLPGRTAKGK
RSHTRAVNGIDGDIRLNRALWVMAEQMQQALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-95 76
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-95 75
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-95 75
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-97 75
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 3e-94 74
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 3e-94 74
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-95 74
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-96 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-95 74
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 3e-94 74
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 9e-94 74
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-96 73
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-93 73
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-93 73
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-92 72
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-73 54
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 4e-74 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_2690 YP_008482283.1 hypothetical protein VFG1526 Protein 2e-97 75
SPUCDC_2690 YP_008482283.1 hypothetical protein VFG1615 Protein 2e-96 74
SPUCDC_2690 YP_008482283.1 hypothetical protein VFG0658 Protein 5e-94 73
SPUCDC_2690 YP_008482283.1 hypothetical protein VFG1676 Protein 3e-92 72