Gene Information

Name : TC41_2804 (TC41_2804)
Accession : YP_005519216.1
Strain : Alicyclobacillus acidocaldarius Tc-4-1
Genome accession: NC_017167
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2664902 - 2666395 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
GTGGCAGTTCAAGAAGTGAACGCGAGCGCTCTGCATCCGGATGTCGTCGAGTTTCTCACGGGTCCCAAGGGCTTGTTTAT
TGACGGCGAATTCGTTCCCTCACTCTCCGGTAAAACCTTCAAGTCTATCAATCCCGCGACGGAAGAAGTCCTGGTAGAAG
TCGCCGAGGCGGAAGCCCCCGATATCGACCGCGCGGTCAAAGCTGCTCGTCGCGCCTTTGAGTCCGGTCCGTGGTCGCGC
ATGAGCGCCGCAGAACGGTCTCGGTTGCTCTACAGACTGGCAGATCTGATGGAAGAACATAAGCTGCAGCTCGCTCAGCT
GGAGACACTCGATAACGGCAAACCCATTCGCGAGTCCCTGAACGCAGACCTTCCCCTTGCGATTGAACACATTCGCTACT
ACGCCGGCTGGCCCACCAAAGTCGTGGGACAGACCATCCCAGTAGCAGGAAAATACTTCAATTACACGCGCCACGAGCCC
GTTGGCGTAGTGGGCCAGATCATCCCGTGGAACTTCCCGCTCCTCATGGCGTGCTGGAAAATCGGCGCTGCGTTGGCCAT
GGGCTGCACGGTGGTACTCAAGCCGGCCGAGCAGACGCCGCTCTCCGCACTCTACCTGGCCAAACTGATTCAGGAAGCCG
GCTTCCCACCGGGTGTCGTTAACGTCGTGCCGGGCTTTGGCGAGACCGCTGGACAGGCGCTCGTGGAGCATCCGGACGTC
AACAAGATTGCGTTCACCGGATCGACGGAAGTCGGCAAGCTCATCATGCGCAACGCTGCGGCTACGCTGAAGCGCGTCAC
GCTTGAACTCGGCGGCAAGTCCCCGAACATCATTCTCCCCGATGCCGACATGAGCCGAGCCATCCCAGGCGCGTTCATGG
GGATCATGTTCAACCAGGGCCAGGTGTGCTGCGCCGGATCGCGCCTGTTCGTGCAGAAGAAAGCGTACGACAACGTGGTG
GCCGATCTCGTCTCCCTCGCGAAGAAGATCCGCCAGGGCCCGGGTCTGGACCAAAGCACGGAGATGGGACCGCTCGTGTC
CGATGAACAGGAAAAGCGCGTGCTCGGCTACATCGAGAAGGGCGTGGAAGAGGGCGCCGAGGTCCTCGTGGGCGGCGGCA
AGGCCACGGATCGCGGATACTTCGTGCAGCCGACCATCTTTGCCAACGTCCGGGACGACATGACCATCGCGCGCGAAGAG
ATCTTCGGACCGGTGGTCGCGGCGATGCCGTTTGAAGACCTGGACGAAGTCATTGCGCGCGCGAACGACACGGAGTACGG
CCTGGCGGCCGGTGTGTGGACGGAGAATATCCGCAACGCCCACTATATCGCCAGCAAGCTGAAGGCCGGCACTGTTTGGG
TCAACTGCTACAACGTGTTTGACGCGGCGGCTCCGTTTGGTGGATACAAGCAGTCTGGTATCGGGCGCGAAATGGGCTCG
TATGCGTTGAACAACTACACGGAAGTCAAGGACGTCTGGATCAGCTTGAGCTGA

Protein sequence :
MAVQEVNASALHPDVVEFLTGPKGLFIDGEFVPSLSGKTFKSINPATEEVLVEVAEAEAPDIDRAVKAARRAFESGPWSR
MSAAERSRLLYRLADLMEEHKLQLAQLETLDNGKPIRESLNADLPLAIEHIRYYAGWPTKVVGQTIPVAGKYFNYTRHEP
VGVVGQIIPWNFPLLMACWKIGAALAMGCTVVLKPAEQTPLSALYLAKLIQEAGFPPGVVNVVPGFGETAGQALVEHPDV
NKIAFTGSTEVGKLIMRNAAATLKRVTLELGGKSPNIILPDADMSRAIPGAFMGIMFNQGQVCCAGSRLFVQKKAYDNVV
ADLVSLAKKIRQGPGLDQSTEMGPLVSDEQEKRVLGYIEKGVEEGAEVLVGGGKATDRGYFVQPTIFANVRDDMTIAREE
IFGPVVAAMPFEDLDEVIARANDTEYGLAAGVWTENIRNAHYIASKLKAGTVWVNCYNVFDAAAPFGGYKQSGIGREMGS
YALNNYTEVKDVWISLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-82 47
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-80 47
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-83 46
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-83 46
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-83 46
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-83 46
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-65 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC41_2804 YP_005519216.1 aldehyde dehydrogenase VFG0082 Protein 5e-83 47