Gene Information

Name : BBta_2939 (BBta_2939)
Accession : YP_001238972.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3057769 - 3059307 bp
Length : 1539 bp
Strand : -
Note : Localization: 2 : Cytoplasmic; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGGATAAGGCCACACCCAAAGCCGACATCTACAAGGCCAATCTCGACCGCGCCGCCCCCCTGCTCGCCAAGCTCAAGGA
CGAGGGCATCGGCCACTTCATCGATGGCAAGGTGGTACCGGCGATTTCGGGCGCGACGTTCGAGACGAAGTCGCCAATCG
ACAACACCGTGCTGGCCAAAGTAGCGCGCGGCAATGCCGAGGACATCGACCGCGCGGCGACCTCTGCTGCGCTCGCTTTC
AAATCCTGGCGCGAGATGGCGCCGGCGATGCGGCGCAAGCTCCTGCACCGCGTGGCCGATGCGATCGAGGATCATGCCGA
CGACATCGCCGTGCTCGAATGCATCGACACCGGTCAGGCCTATCGCTTCATGGCCAAGGCGGCGATCCGCGCCGCCGAGA
ATTTCCGGTTTTTCGCCGACAAATGCACCGAGGCGCGCGACGGGCTGAATACGCCGAGCGAAGAGCACTGGAACATCTCC
ACGCGGGTACCGATCGGCCCGGTCGGCGTGATCACCCCGTGGAACACGCCGTTCATGCTGTCGACCTGGAAGATCGCCCC
GGCGCTCGCGGCAGGCTGCACGGTCGTGCACAAGCCGGCCGAATGGTCGCCGATCACGGCGCACTGGCTGGCAAAACTCG
CCAAGGACGCCGGTATCCCCGATGGCGTGCTCAACACTGTCCATGGCTTCGGCGAGGAGGCCGGCAGGGCGCTGACCGAA
CATCCTGCCATCAAGGCGATCGGCTTCGTCGGCGAGAGCACGACCGGGTCGGCGATCATGGCGCAGGGCGCGCCGACTCT
GAAACGCGTGCATTTCGAGCTTGGCGGCAAGAACCCGGTGATCGTGTTCGACGATGCCGACCTCGATCGCGCGCTCGACG
CCGTCGTGTTCATGATCTATTCGCTCAACGGCGAGCGCTGCACCTCCTCGAGCCGCCTGCTGGTGCAGCAGAACATTGCC
GAGACATTCACGGCCAAGCTCGCGGCGCGCGTGCGTGCGCTGAAGGTCGGTCATCCGCTCGATCCCGCGACCGAGGTCGG
GCCGCTGATTCATGAGCGGCACCTCGCCAAGGTCTGCTCTTATGTCGACATCGCGCGCCAGGACGGGGCGATCATTGCCG
TCGGCGGCAAGCCGGTCGCTGGTCCGGGCGGCGGCCACTACGTCGAGCCCACGCTCGTCACGGGCGCGAGCCAGATCATG
CGCGTGGCGCAGGAAGAGGTGTTCGGGCCATTCCTGACCGTGATCCCGTTCGGCGACGAGGCGGACGCGATCGCGATCGC
CAATGACGTGCAGTATGGCCTCACCGGCTATGTCTGGACCGGCGACATGGGCCGCGCGCTGCGCGTCGCCGACGCGCTGG
AGGCCGGCATGATCTGGCTGAACTCGGAGAACGTCCGCCATCTGCCGACGCCGTTCGGCGGCATGAAGGCGTCCGGCATC
GGCCGCGACGGCGGCGACTATTCATTCGACTTCTACATGGAGACCAAGCACGTCTCGCTCGCGCGCGGCACCCACAAGAT
CCAGCGGCTCGGCGTGTAA

Protein sequence :
MDKATPKADIYKANLDRAAPLLAKLKDEGIGHFIDGKVVPAISGATFETKSPIDNTVLAKVARGNAEDIDRAATSAALAF
KSWREMAPAMRRKLLHRVADAIEDHADDIAVLECIDTGQAYRFMAKAAIRAAENFRFFADKCTEARDGLNTPSEEHWNIS
TRVPIGPVGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEWSPITAHWLAKLAKDAGIPDGVLNTVHGFGEEAGRALTE
HPAIKAIGFVGESTTGSAIMAQGAPTLKRVHFELGGKNPVIVFDDADLDRALDAVVFMIYSLNGERCTSSSRLLVQQNIA
ETFTAKLAARVRALKVGHPLDPATEVGPLIHERHLAKVCSYVDIARQDGAIIAVGGKPVAGPGGGHYVEPTLVTGASQIM
RVAQEEVFGPFLTVIPFGDEADAIAIANDVQYGLTGYVWTGDMGRALRVADALEAGMIWLNSENVRHLPTPFGGMKASGI
GRDGGDYSFDFYMETKHVSLARGTHKIQRLGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-88 44