Gene Information

Name : sinH (SC2514)
Accession : YP_217501.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : intimin-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2669289 - 2671481 bp
Length : 2193 bp
Strand : -
Note : IPR003535: Intimin bacterial adhesion mediator protein

DNA sequence :
ATGGTGCGAAGGATTCGCATTCTGGTTTTGCTATTAGTGTCTGGAGTCTCAGTTGCGGCTTCTGGCGCAGATAACTCTGC
ATCTGCAAATGATGAAAGCCACTCCTCCCTGCCTGATTTAGCCAGCGAATCCGCGAAAAAAGAAGAACAGGAAAATAAAG
GAAAGTCCTTTAAAAAACAGGGCGCTGACTACTTTATTAATTCCGCCACCCAGGGCTTTGATAATCTCACCCCGGAAGCG
CTGGAATCCCAGGCGCGTAGCTATTTGCAAAACCAAATCACTTCCTCAGCACAGTCATATCTTGAAGGTGTAATGTCACC
TTATGGCAAGATCCGTACCAGCCTGTCCGTGGGCGAAGGCGGCGATCTGGACGGCAGTTCGCTGGATTATTTTATTCCCT
GGTATGACAACCAGAGCACGCTTTTCTTTAGCCAGATTTCGGCTCAGCGTAAGGAAGACCGCACCATTGGTAACTTTGGG
CTTGGCGTTCGCCAGAACGTCGGCAACTGGCTGCTTGGCGGCAACGCATTCTATGACTACGATTTTACGCGCGGTCACCG
TCGATTAGGTCTGGGAACCGAAGCCTGGACGGATTACCTGAAATTCTCCGGCAACTATTACCATCCTCTTTCTGACTGGA
AAGACTCCGAAGATTTCGACTTTTATGAAGAACGACCCGCGCGCGGCTGGGATATCCGCATGGAAAGCTGGCTGCCGTTT
TATCCGCAGCTTGGCGCTAAATTAGTTTACGAACAGTACTACGGCGATGAAGTAGCGCTGTTTGGCACCGATGATCTGCA
AAAAGATCCTCATGCCGTCACTTTGGGGCTGGAATATACGCCGGTACCGCTGGTCACGGTTGGTACGGATTACAAAGCCG
GTACTGGCGATAGTAACGACTTTAGCGTTAACGCGACCGTGAACTACCAGATAGGCACGCCGCTGGCGGCGCAGCTCGAT
CCGGAAAACGTTAAAATTCAGCACTCCTTAATGGGCAGCCGCACCGATTTTGTCGATCGTAACAATTTCATCATTCTCGA
ATATCGCGAGAAAGATCCGCTGGACGTCACGTTGTGGCTGAAGGCTGACGCCACCAATGAACACCCGGAATGCGTGATTG
AAGATACGCCTGAGGCCGCTGTTGGTCTGGAAAAGTGCAAATGGACTGTCAACGCGCTGATTAACCACCATTACAAAATT
ATTTCTGCCTCCTGGCAGGCGAAAAACGACGCCGCCCGTACGCTGGTGATGCCGGTGGTAAAAGCTAATGCGTTAACCGA
AGGCAACAATAACAGCTGGAATCTGGTGCTTCCTGCCTGGGTTAATGCCGATACCGAAGAGCAGCGCACCGCCCTGAACA
CCTGGAAAGTACGCATGACGCTGGAAGATGAAAAGGGCAATAAGCAGAACTCCGGCGTGGTGGAAATCACCGTCCAGCAG
GATCGCAAAATTGAGCTGATCGTCGACAACATTGCCGATACCGATCGCAGCGATCACAGCCATGAAGCCAGCGCGCTGGC
CGATGGCGAAGACGGCGTGGTGATGGATCTGCTGATCACCGATTCCTTTGGCGACTCCACGGATCGCAATGGTAACGAAC
TGGTGGACGATGCCATGACGCCCGTGTTGTACGACAGCAATGATAAAAAAGTCACCCTGGCCCAGACGCCCTGCACCACG
GAAACCCCCTGCGTGTTTATTGCCAGTCGTGACAAAGAAGCGGGGACGGTGACGCTTTCCAGCACCCTGCCGGGGACTTT
CCGCTGGAAGGCGAAAGCAGACGCCTATGGCGACAGTAACTACGTTGATGTCACTTTTATCGGCGACAACCTGAGCGCGC
TGAATGCGGTGATTTATCAGGTCAAAGCCGCCAACCCTGTCAACCTTATCGGCAAAGAAGATAAGCACCCTACGGTCAAT
AATGCTTACCGTTTCCTGCTGTGGCGCGACAAAAATAAAGACGGCGTATTCCAGATGTCCGAGCAGCTCACGGAAGAAGA
GATGGCGCTGTACGACTACCAGTGGGAGTTTACCGGGCAGAGTACAAACGGACATACCGGCGCGCTGGCCAACACCATGA
ATGAAGATCTTGTCCTGCCAGTAACCAATAAAGAGGCGGCGCAGAAGTTTGCCGCCAATGTGGAAGATGGCGTTCAGGGT
TACGGCATACGCGTTACGTATAGTCAGAAATAG

Protein sequence :
MVRRIRILVLLLVSGVSVAASGADNSASANDESHSSLPDLASESAKKEEQENKGKSFKKQGADYFINSATQGFDNLTPEA
LESQARSYLQNQITSSAQSYLEGVMSPYGKIRTSLSVGEGGDLDGSSLDYFIPWYDNQSTLFFSQISAQRKEDRTIGNFG
LGVRQNVGNWLLGGNAFYDYDFTRGHRRLGLGTEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRMESWLPF
YPQLGAKLVYEQYYGDEVALFGTDDLQKDPHAVTLGLEYTPVPLVTVGTDYKAGTGDSNDFSVNATVNYQIGTPLAAQLD
PENVKIQHSLMGSRTDFVDRNNFIILEYREKDPLDVTLWLKADATNEHPECVIEDTPEAAVGLEKCKWTVNALINHHYKI
ISASWQAKNDAARTLVMPVVKANALTEGNNNSWNLVLPAWVNADTEEQRTALNTWKVRMTLEDEKGNKQNSGVVEITVQQ
DRKIELIVDNIADTDRSDHSHEASALADGEDGVVMDLLITDSFGDSTDRNGNELVDDAMTPVLYDSNDKKVTLAQTPCTT
ETPCVFIASRDKEAGTVTLSSTLPGTFRWKAKADAYGDSNYVDVTFIGDNLSALNAVIYQVKAANPVNLIGKEDKHPTVN
NAYRFLLWRDKNKDGVFQMSEQLTEEEMALYDYQWEFTGQSTNGHTGALANTMNEDLVLPVTNKEAAQKFAANVEDGVQG
YGIRVTYSQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sinH AAD25115.1 SinH Virulence CS54 island Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sinH YP_217501.1 intimin-like protein VFG2307 Protein 0.0 99