Gene Information

Name : GYMC52_2808 (GYMC52_2808)
Accession : YP_004133326.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2866775 - 2868265 bp
Length : 1491 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_0744 betaine-aldehyde dehydrogenase

DNA sequence :
ATGATTTCTATGAAAACAACAGAAGCTGGTTTATGGATTGGAGGAGAATGGCGGCCGGCGGCGGATGGCGCGATGTTTGA
CGTCATCGACCCGGCGACAGGCCAAGTGACGGCCCGTGTGGCCAACGCCGGGGAAAAAGATGTCGACGCGGCGGTCGCCA
TCGCCGAAGAGGCGTTTTCGGACCGGCGTTGGCTGTCGATTCCGCCGCTCGAGCGCGGGCGCATCTTGCGGCGCATCGCC
GAACTGATCCGCCAGCATCATGATGAACTCGCGCAGCTCATGACGCGGGAAAACGGCATGCCGATCAATCTAGCGTTGTT
TATTGAAATTCCGCTTGCCGCCGACTGCTTCGACTTTTTCGCCTCGCTCGTCGTCAAGCCGCAAGGGGAGGTGCTGCCGT
TTTCCGTCGCCGGCTCGGCGCCGGATTATATGGCGTGGACGATGAAGGAGCCGATCGGGGTGGCTGGGCTCATCACCCCG
TGGAACTTTCCGCTTTTGATGCCGACGTGGAAAATCGCCCCAGCGCTGGCGGCGGGCTGTACGATGGTGTTAAAACCGGC
GCCGGAAACGCCGCTGACGGCGTTGAAGCTTGCTGAGATTTGCCATGAGGCCGGCGTGCCGGAAGGCGTCATCAACGTCC
TGCCTGGACTCGATGAGGCCGGAAAAGCGCTCGTCAGCCACCCTGGCGTGCCGAAAATCGCGTTTACCGGCGAAACGGAA
ACCGGGCGCCGCATCTTGCAAGCGGCCGCTCCCCACATTAAGCGGGTGACGCTCGAGCTTGGCGGGAAGTCGCCGAATAT
CATCTTTGCGGACGCGGATCTTGAACAGGCGGCGAAAAGCGCGCTGTTTGGCGTGTTCTACAATTCAGGGCAAGTGTGCC
AAGCGGGAAGCCGCATTTTAGTCGAACGGCCGGTTTACGAAACGTTTGTCGAGCTGTTGGCCAGCAAAGCGAAAAAGCTG
AAAGTCGGGCCCGGCACGGATGCGCGCAGCGACCTTGGCCCCGTCATCAGCCGGGAGCAATACGAGAAAGTATTGCGCTA
CATTGACATCGGCAAGCAGGAAGGGGCGAAGCTCGTTGCGGGAGGGAGCGCTTTAGATGGGCTTGGCGGCGGCTATTTCA
TTGGACCGACCGTCTTTGCCGATGTATCGCCATCGATGTGCATCGCCCGTGAAGAAATTTTCGGGCCGGTCGCCGCTGTC
ATTCCGTTTCAAGATGAAGAGGAAGCCGCCTCCATTGCCAACGATACGATTTACGGCTTGGCGGCGGCGGTTTGGACGAA
TGACATCAAACGGGCGCTCCGCTTAGCGCGGCGGGTGAAAAGCGGAACCGTGTGGATCAACACGTACCAAGTGCTGTCGC
CGACTGCGCCGTTTGGCGGTTATAAGCAGAGCGGCCTCGGCCGCGAGCTCGGGATGCAGGCGCTTGAAGCGTATTTAGAA
ACGAAAACGGTCATTTGCGACCTCAATGAACGGCCGATGACGTTGTTTTAA

Protein sequence :
MISMKTTEAGLWIGGEWRPAADGAMFDVIDPATGQVTARVANAGEKDVDAAVAIAEEAFSDRRWLSIPPLERGRILRRIA
ELIRQHHDELAQLMTRENGMPINLALFIEIPLAADCFDFFASLVVKPQGEVLPFSVAGSAPDYMAWTMKEPIGVAGLITP
WNFPLLMPTWKIAPALAAGCTMVLKPAPETPLTALKLAEICHEAGVPEGVINVLPGLDEAGKALVSHPGVPKIAFTGETE
TGRRILQAAAPHIKRVTLELGGKSPNIIFADADLEQAAKSALFGVFYNSGQVCQAGSRILVERPVYETFVELLASKAKKL
KVGPGTDARSDLGPVISREQYEKVLRYIDIGKQEGAKLVAGGSALDGLGGGYFIGPTVFADVSPSMCIAREEIFGPVAAV
IPFQDEEEAASIANDTIYGLAAAVWTNDIKRALRLARRVKSGTVWINTYQVLSPTAPFGGYKQSGLGRELGMQALEAYLE
TKTVICDLNERPMTLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-82 46
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-72 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-82 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-82 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-85 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-85 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-85 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-84 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_2808 YP_004133326.1 aldehyde dehydrogenase VFG0082 Protein 1e-82 43