Gene Information

Name : PM3016_2846 (PM3016_2846)
Accession : YP_005312871.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : DhaS protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3303653 - 3305134 bp
Length : 1482 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAATCGACGATGGCGCAGCGCAGCCGGCTGGACCTTTTCCTTCAGGGGACGAAACGATTGTTTATCGGCGGTCA
ATTTGTGGAAGCGATTGCAGGACGGACGTTCGAGACACCGAACCCGGCAACCGGGGAGACGCTGGCCGTGGTGAGCGAAG
GGGATGCCGAAGATATTGATGCGGCTGTACGGGCCGCCCGCCGAGCCTTCGACGAAGGACCTTGGTCGCGGATCAGCGCG
GCGGAGCGGGGACGGCTGATGTACAAGCTTGCGGACCTCATCGAGGAGAACAGGGAAGAGCTCGCCCGGCTGGAGACGCT
CGACAACGGCAAGCCGATCCGCGAGACGCGCGGGGCCGACCTGCCGCTGGCCATCGAGCACCTCCGTTATTATGCCGGCT
GGACCACGAAGCTGACGGGGCAGACGATCCCGGTCAGCGGTGATTATTTCAACTATACAAGGCATGAGCCGGTCGGCGTA
GTCGGCCAGATTATCCCGTGGAACTTCCCGCTGCTCATGGCGATGTGGAAGATCGGTCCGGCGCTGGCCACCGGATGCAC
GATCGTGCTGAAGCCGGCGGAGCAGACGCCGCTGTCGGCGCTCTACCTGGCTGAGCTCATTCAGGAAGCGGGCTTCCCGG
ACGGCGTCGTGAACATCGTGCCGGGCTTCGGGGAGACGGCCGGCCAGGCGCTGGTGAACCACCCGCTCGTGGACAAGATC
GCCTTCACCGGCTCGACGGAGGTCGGCAAGCTGATCATGCGCCAGGCCGCCGATTCGCTCAAGCGCGTGACCCTCGAGCT
CGGCGGCAAGTCGCCGAACATCATTCTGCCGGACGCGGATCTCTCCCGCGCGATCCCGGGGGCGCTCAGCGGCATCATGT
TCAACCAGGGGCAGGTCTGCTGCGCGGGCTCGCGTCTGTTCATCCAGAAGAAAGTGTACGACAACGTCATCGCCGACCTG
GCGCTTCACTGCCGGAACCTCAAGCAGGGAGCGGGGCTCGAGGAAGGCACGGAGATCGGACCGCTCGTCTCCGCCGAGCA
GCAGAACCGCGTGCTGCGCTACATCGAGCAAGGGCAAAGTGAAGGCGCCGAGCTCGTATACGGCGGCTCGAACCCGTACG
GGGCCGGGTACTTCGTGGAGCCGACGGTGTTCGCGGGTGTGCGCGACGAGATGACGATCGCCCGCGAGGAGATCTTCGGG
CCGGTCGTGGCGGCGATGCCGTATGAGGATCTCGACGATGTCCTCGCCCGTGCGAACGCGAACGACTACGGCCTGGCCGC
CGGGCTGTGGACCGAGAATATCAAGAACGCGCACTACGCGGCTTCCCGTCTGAAGGCGGGCACGGTGTGGGTCAACTGCT
ACAACGTGTTCGACGCGGCCTCCCCGTTCGGCGGCTACAAGCAGTCGGGCATCGGCCGGGAGATGGGCTCGTACGCCCTC
GACAATTACACGGAAGTCAAGAGCGTCTGGATTCAGCTGTAG

Protein sequence :
MSESTMAQRSRLDLFLQGTKRLFIGGQFVEAIAGRTFETPNPATGETLAVVSEGDAEDIDAAVRAARRAFDEGPWSRISA
AERGRLMYKLADLIEENREELARLETLDNGKPIRETRGADLPLAIEHLRYYAGWTTKLTGQTIPVSGDYFNYTRHEPVGV
VGQIIPWNFPLLMAMWKIGPALATGCTIVLKPAEQTPLSALYLAELIQEAGFPDGVVNIVPGFGETAGQALVNHPLVDKI
AFTGSTEVGKLIMRQAADSLKRVTLELGGKSPNIILPDADLSRAIPGALSGIMFNQGQVCCAGSRLFIQKKVYDNVIADL
ALHCRNLKQGAGLEEGTEIGPLVSAEQQNRVLRYIEQGQSEGAELVYGGSNPYGAGYFVEPTVFAGVRDEMTIAREEIFG
PVVAAMPYEDLDDVLARANANDYGLAAGLWTENIKNAHYAASRLKAGTVWVNCYNVFDAASPFGGYKQSGIGREMGSYAL
DNYTEVKSVWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-93 50
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-94 48
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-94 48
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-94 48
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-94 48
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-94 47
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-75 44
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 6e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_2846 YP_005312871.1 DhaS protein VFG0082 Protein 1e-93 50