Gene Information

Name : I634_15015 (I634_15015)
Accession : YP_008177100.1
Strain : Alteromonas macleodii Ionian Sea U8
Genome accession: NC_021712
Putative virulence/resistance : Virulence
Product : response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3416864 - 3417544 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGAAAGTGCTACTTGTAGAAGATGATCCTAAAGTTGCCTCGCACATTGCAAATGGACTATTGGGTGAAGGGCATGAATG
TATTACCGTTGGTGACGGCGCATCAGGCTTCAACGAAGCCTCAAGTAATGAGTTAGATGCGGTAATTTTAGACGTAATGC
TGCCGGAACTTGACGGTTTTTCTGTCTTGGAAAAACTACGAGAGGAAGGTAACACCACACCCGTTCTGCTATTAAGTGCC
AAGAGCCAAGTTGAAGACAAGGTAAAAGGTCTACGCACAGGCGCAAACGACTACCTGACCAAACCTTTCGCCTTCGAGGA
ATTGTTGGCGCGTGTTGAAGGTTTAGCTGGTCGCAACAAAGACGGTGAAGATAAAACCCTCATCAAAGTCGGCGATCTCA
CCCTCGATTTAGTAAATCGCAAAGTGTTGCGAGGCGATCAAGAAATTGATCTTCAATCGAAAGAGTTTCAGCTTTTAGAG
TGTTTGCTTCGTCACAAGGGTAAGGTTGTTACCCGGAGCATGCTGCTAGAGCAAGTTTGGAATTATCATTTCGATCCGCA
AACCAATGTTATCGACGTGCATATTAGCCGCTTGCGACAAAAAGTTGATAAAGCGTTTAATGTTCCGCTTATTGAAACCG
TTCGCGGTACCGGTTATCGCATAGCGGATGGGCTTGCATGA

Protein sequence :
MKVLLVEDDPKVASHIANGLLGEGHECITVGDGASGFNEASSNELDAVILDVMLPELDGFSVLEKLREEGNTTPVLLLSA
KSQVEDKVKGLRTGANDYLTKPFAFEELLARVEGLAGRNKDGEDKTLIKVGDLTLDLVNRKVLRGDQEIDLQSKEFQLLE
CLLRHKGKVVTRSMLLEQVWNYHFDPQTNVIDVHISRLRQKVDKAFNVPLIETVRGTGYRIADGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-37 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0308 Protein 4e-47 48
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0638 Protein 5e-44 48
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0083 Protein 2e-47 46
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0347 Protein 2e-45 46
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0111 Protein 3e-48 46
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0197 Protein 3e-46 46
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0125 Protein 7e-45 44
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein AE016830.1.gene1681. Protein 4e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG0596 Protein 2e-37 43
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG1389 Protein 4e-35 43
I634_15015 YP_008177100.1 response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG1390 Protein 6e-39 42