Name : iroC (SC2705) Accession : YP_217692.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2872255 - 2875911 bp Length : 3657 bp Strand : + Note : IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter DNA sequence : ATGCCCGCGACTCATTCCCCCATGCCCGCTCGTGCCTGGATAGTTCGCCTTGCCCGCGTGTGTTGGGAACGTAAAACACT GAGCATCATTGTCATCGTAGCATCAGTATCGACCATTTTACTGGCTGCGCTGACGCCGCTAATAACGCGTCAGGCCGTCA ATGACGCGATAGCAGGCGATACGACCCACCTGCCGTTACTTGCCTGCGGCCTGCTGTTAATTGCCCTTTTTGATTTTATC GGGAATTACGTGCGCCGCGGCTATGCCGGGGAACTCTCGTTGTGGGTTCAGCATACGTTACGTAGCCGTGCGTTCGACAG TATTCAAAAACTGGACGGCGCAGGCCAGGACGCCTTACGTACCGGGCAGGTCATTTCGCGTACCAACAGCGATCTTCAAC AGGTACACACCTTGCTACAAATGTGCCCGGTGCCGATGGCGGTACTCACTTACTATGTGGCCGGTATCGCGGTGATGCTA TGGATGTCGCCATCCATGACGCTTATCGTGATTTGCGTACTGGCCGCCCTTGCCATTACCGCCCTGCGCGCCCGTCGCCG TGTTTTCGCGCAAACGGGGCTTGCCTCAGACCGGCTGGCGCACATGACGGAACATATGCGCGAAGTATTGGAACAGATCT CAGTGGTGAAGTCCTGCGTGGCGGAGTTACGCGAAACGCGTTGGCTCGATGGTCAGTCGCGGCAGATGGTGCGGGTACGC ATCGGCGCCGCTATCTCGCAGGCGATGCCGGGCGCAACCATGCTGGCACTACCAGTGATAGGGCAAATCGTCCTGCTGTG CTATGGCGGCTGGTCGGTAATGAATGGGCGCATCGATCTGGGAACCTTCGTTGCGTTCGCGAGTTTTCTCGCTATGCTGA CCGGCCCTACCCGCGTACTGGCATCGTTTTTGGTTATCGCACAGCGCACACAGGCGTCGGTAGAGCGCGTCTTCGCGCTT ATCGACACGCGTTCTCGCATGGAAGACGGTACTGAGTCGGTTGAGGGTCAGATTATCGGGCTGGACGTGGAGAAGATGAG TTTCCACTACGACAACGGTAACCGTATCCTCAATGAGATCTCGTTTTCCATTCACGCCGGTGAAACCGTGGCGGTGGTTG GCGCATCCGGCTCCGGGAAATCAACATTGCTGATGTTGCTGGCGCGCTTTTACGATCCCACCTCCGGCGGAGTATGGCTC AACACCACTACGGGTCAACAGAATATTCGCGACCTGAAACTGACGGCGCTTCGTCGTCGCGTTGGCGTAGTTTTTGAAGA CGCGTTTCTGTTTGCCGGTACGGTGGCGGAAAACATCGCCTATGGGCACCCGCAAGCGACTCAGGACGACATTCGACGCG CCGCCGATGCCGCAGGCGCCAGCGGGTTCATCAATGCGCTACCGCAGGGGTTCAACACCCGACTGACCGAACGCGGAAGC AACCTCTCCGGCGGCCAACGCCAGCGTATTGCGCTAGCCCGGGCACTGATTACCGCGCCGGAACTGCTGATTCTCGATGA CACCACCTCGGCGGTCGATGCCGGTACTGAAGCGGAAATTAACACGGCTCTTGGTCGTTATGCCGATAATGAGCATATGC TGCTGGTGATTGCACGCCGCCGTTCAACACTGCAGTTAGCCGATCGGATCGTCGTGCTGGATAAAGGCCGCGTCGTGGAT ATCGGTACCCAGGCGGAGCTGGATGCAAGGTGTCCGACGTTTCGCTCGCTGATGAGCGGCGAGGGGGATTTTCTCGCCCT TGCCCCGGCAGAACAACGTACGCTATGGCCAACAACGCAGGCGGTAAAATCCGACGACGCGCATGAGCGCCAGACACCCG CCGGAAAAGGTTTTGTCGACCGGATGACGCGCGTTCCAGAACGCGCCGTACAGATGGCGCTGGCAGGCCACGGGCGTCAA GTCTCATCGCTGCTGACGCCAGTAGCCTGGATGTTCGTCATCGCCGCCCTGCTTATCGCGCTTGATTCCGCCGCAGGCGT TGGCGTGCTGGTGCTTTTGCAGCGCGGTATTGACTCAGGCGTTGCCGCAGGGGATATGTCGACTATTGGCATATGCGCTC TGCTCGCGCTGTGTCTGGTGGCGATTGGTTGGTGCTGCTATGCGCTGCAAACGATCTTCGCCGCCCGCGCGGCAGAGTCG GTACAGCATACGGTACGCTTACGCAGCTTTAGCCACCTGCTACGCCTGAGTCTTCCCTGGCACGAGAAGCACATCGACTC GCGTCTTACTCGCATGACCGTCGATGTTGATTCACTCGCCCGATTTCTGCAAAACGGTCTTGCCAGCGCGGCCACCAGCA TCGTGACAATGGTCGCTATCGCCGCGGCAATGTTCTGGCTTGACCCCATTCTTGCGTTAACGGCATTAAGCGCCGTGCCT GTAGTGATGCTGGCGACGTGGATTTACCGCCGTTTGAGCTCGCCTGCCTACGCTCAGGCACGGCTGGAAATTGGTAAGGT GAACAGTACGCTTCAGGAAAAGGTCTCCGGTATGCGGGTAGTACAGTCACACGGCCAACAGAAGCAGGAAGCCGCCAGGC TACGGGCGTTATCAGATAACTTCCGCGCCACCCGCGTGCGGGCGCAAAAATACCTTGCCGTTTATTTTCCGTTCCTGACC TTCTGCACCGAGGCCGCCTATGCCGCCGTGCTTTTAATCGGGGCGACCCGGGTCGCCGGAGGCGAAATGACGCCCGGGAT ACTGGCGGCGTTCTTCCTGCTACTGGGACAATTTTATGGCCCGGTACAGCAGTTGTCAGGCATTGTTGATTCCTGGCAGC AGGCGACCGCCAGCGGCAAACATATCAATGCGCTATTGGCGACTGAGGACACGGAGAATATTGAACCGTCCTCCATAACG CCTGGCACTGGCGGCGCGCTACGTCTGGAGGCATTGACATTCCGCTATCCCGAAAAAACGCAACCTGTGCTTGATAAGCT CTCGCTCACCATTCCGCCAGGAACTGTAGTCGCGGTGGTCGGACGTAGCGGCGCTGGCAAATCGACGTTGATCAAGCTGC TGGCCGGACTCTACTCTCCCGGTAGCGGGCAAATCCGTGTCGGTGAGCGCCTAATTGATGCAGCGTCGCTTAGTGATTAT CGTCGCCAGACGGGGCTGGTCACTCAGGATGTCGCATTATTTAGCGGCGATATTGCCGAAAATATCCGCTATCCGCGGCC AAACAGCAGCGACACGGAGGTGGAGAGCGCGGCGCGACGGGCGGGACTCTTTGAAACTGTGCAACATCTGCCGCTGGGGT TCCGTACTCCGGTCAATAACGGCGGCACGGATCTGTCCGCGGGCCAGCGTCAGTTGATTGCCCTCGCCCGCGCCCACCTG GCGCAGGCGCATATTCTGCTGCTCGACGAGGCGACAGCGCGTATCGACCGTAGCGCCGAGGAGCGCTTAATGACCTCGCT TACCAGGGTGACGCATACCGAGAAACGCATCGCGCTTATCGTCGCGCACCGGCTGACCACCGCTCGCCGTTGCGATGTTA TTGTCGTAATCGATAAAGGATGTATCGCTGAATATGGCAGCCATGAGCAGTTGATAGCGACTCATGGCCTGTATGCTCGT CTGTGGCGGGACAGCATCGGCCAGACACGCGATACGCAAGGAGAGGTCATAGGATAG Protein sequence : MPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLLLIALFDFI GNYVRRGYAGELSLWVQHTLRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPMAVLTYYVAGIAVML WMSPSMTLIVICVLAALAITALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVR IGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFAL IDTRSRMEDGTESVEGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWL NTTTGQQNIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLTERGS NLSGGQRQRIALARALITAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVD IGTQAELDARCPTFRSLMSGEGDFLALAPAEQRTLWPTTQAVKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQ VSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAES VQHTVRLRSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVP VVMLATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQKQEAARLRALSDNFRATRVRAQKYLAVYFPFLT FCTEAAYAAVLLIGATRVAGGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEDTENIEPSSIT PGTGGALRLEALTFRYPEKTQPVLDKLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGERLIDAASLSDY RRQTGLVTQDVALFSGDIAENIRYPRPNSSDTEVESAARRAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHL AQAHILLLDEATARIDRSAEERLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIATHGLYAR LWRDSIGQTRDTQGEVIG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 80 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
iroC | YP_217692.1 | ABC transporter | VFG1653 | Protein | 0.0 | 80 |