Gene Information

Name : swp_3181 (swp_3181)
Accession : YP_002312476.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Virulence
Product : Response regulator receiver:Transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3336999 - 3337682 bp
Length : 684 bp
Strand : +
Note : Response regulator receiver:Transcriptional regulatory protein, C-terminal

DNA sequence : 
TTGCGAATTCTTGTTATTGAAGATAACCTAACAACTCGTCAATACTTACAAAAAGCCCTTAAAGAACAGGGTTATGAGAT
TGATTTGGCTGAAAATGGCCAAGATGGTTTATTTTTAGCCCTTGAAGGCGACTACCAATTAATTTTACTCGATCGGATGC
TACCTAAACTAGATGGTTTAACGGTATTAACTACGTTAAGAAATGCGGGAAAACAAACACCCGTCTTAATTCTAAGTGCT
TTAGACAGCGTTTCAGAACGAGTAAAAGGGCTGCGTGAGGGCAGTGATGATTATCTGATCAAACCTTTTGCTCTTTCTGA
ACTGCTGGTACGTATTGAGATATTGATTCAGCGTAAAGGTTCGAATAGTGACAAACAAACCAACGTCTTGCAGGTCGCAG
ATCTAAAGATGGAATTACTGTCTCGAAAAGTATTTAGAGGGAAAAATGAAGTTATTCTTCAACCCAAAGAGTTTAAGCTA
CTACGTTATTTAATGGAGCATAGCGGGCAAGTCGTGTCTCGCTCATTACTGTTTGAAGCCGTTTGGGATTATCAATTTGA
TCCACAAACTAATGTGATTGATGTGCATATGGCAAGATTACGAAAAAAGGTAGAATTTGATGGTCTTCCCTCCCTTCTTG
AAACAGTACGTGGCGTTGGTTACCGCATGGTGGAACAGGGTTAA

Protein sequence : 
MRILVIEDNLTTRQYLQKALKEQGYEIDLAENGQDGLFLALEGDYQLILLDRMLPKLDGLTVLTTLRNAGKQTPVLILSA
LDSVSERVKGLREGSDDYLIKPFALSELLVRIEILIQRKGSNSDKQTNVLQVADLKMELLSRKVFRGKNEVILQPKEFKL
LRYLMEHSGQVVSRSLLFEAVWDYQFDPQTNVIDVHMARLRKKVEFDGLPSLLETVRGVGYRMVEQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-41 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0083 Protein 1e-45 49
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0125 Protein 3e-48 48
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0111 Protein 4e-50 48
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0347 Protein 4e-47 47
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0638 Protein 5e-39 47
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0308 Protein 2e-45 46
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein BAC0197 Protein 4e-43 45
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein HE999704.1.gene1528. Protein 4e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein VFG0596 Protein 5e-42 43
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein VFG1389 Protein 9e-40 43
swp_3181 YP_002312476.1 Response regulator receiver:Transcriptional regulatory protein VFG1390 Protein 1e-42 42