Gene Information

Name : cesD2 (ROD_29731)
Accession : YP_003366487.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : T3SS chaperone CesD2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3148526 - 3148933 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGGTCGATACGTTTAATGACGAAGTGCTTAATTGCTATCTTGAACAAAAAGGATATATACCACAAAAGGAATTCCTTTT
TGGCAGTGCCTTTTTTATCGGATGGCGGATTGAGACACCTTTTTTCTCATTAGCGTACAGACTGGATGAACAAGAACTGA
TTTTGTGCTCTTTTGAAGCACGTAACCAAACAGGGCTAAACGGCCCTGTTTTATCACTGACTCGCTTGCTCGAAGAGTTG
TACCACCATTTTTCGGCTATTAAGAAAATCAGTGCCATGAAATCTAAGATTGGTTCAGTTTCAGATCGTCAAAAGCGCGA
AGAGTTATTTAATTACTTCATTAGAAAGGGGGCCGTTCAGCAGGAAACAGAAAACGAAATTTGGTATGTAATGAAAGTAA
ATAATTAG

Protein sequence :
MVDTFNDEVLNCYLEQKGYIPQKEFLFGSAFFIGWRIETPFFSLAYRLDEQELILCSFEARNQTGLNGPVLSLTRLLEEL
YHHFSAIKKISAMKSKIGSVSDRQKREELFNYFIRKGAVQQETENEIWYVMKVNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06384.1 unknown Not tested LEE Protein 8e-52 100
unnamed AAC38397.1 Orf27 Not tested LEE Protein 2e-45 91
unnamed AAK26730.1 unknown Not tested LEE Protein 2e-45 91
cesD2 YP_003223460.1 chaperone CesD2 Not tested LEE Protein 2e-45 91
unnamed AAL57557.1 unknown Not tested LEE Protein 2e-45 91
cesD2 YP_003232168.1 T3SS chaperone CesD2 Virulence LEE Protein 2e-45 91
unnamed AAL60253.1 unknown Not tested LEE Protein 2e-45 91
cesD2 YP_003236073.1 chaperone CesD2 Not tested LEE Protein 9e-46 91
st39 CAC81877.1 ST39 protein Not tested LEE II Protein 2e-45 91
unnamed CAI43859.1 hypothetical protein Not tested LEE Protein 2e-45 91
unnamed AAC31498.1 L0019 Not tested LEE Protein 5e-45 90
unnamed ACU09443.1 conserved hypothetical protein Not tested LEE Protein 5e-45 90
Z5104 NP_290253.1 hypothetical protein Not tested LEE Protein 8e-45 90
ECs4553 NP_312580.1 hypothetical protein Not tested LEE Protein 8e-45 90
cesD2 AFO66329.1 putative chaperone Not tested SESS LEE Protein 3e-33 67
cesD2 AFO66386.1 putative chaperone Not tested SESS LEE Protein 3e-33 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cesD2 YP_003366487.1 T3SS chaperone CesD2 VFG0745 Protein 9e-46 91
cesD2 YP_003366487.1 T3SS chaperone CesD2 VFG0797 Protein 2e-45 90