Gene Information

Name : garL (PANA_3083)
Accession : YP_003521378.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : GarL
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3836
EC number : -
Position : 3459430 - 3460278 bp
Length : 849 bp
Strand : -
Note : 2-dehydro-3-deoxyglucarate aldolase; Similar to Pantoea sp. At-9b, 2-dehydro-3-deoxyglucarate aldolase (NCBI: ZP_05732158.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
TTGATAACAAGCGTCCGTGCCTGGTGCGTTAACTTTTTTGGGCTTCCTTCAGGAAGCCCGTTCCACAGGAGTCAAATCAT
GAGTAATACAGCCTGGCCAAATGAATTCCGTCGCCGCCTGCTGGCAGGTGAAACCCTGATCGGCAGTTGGTGCGCCCTGG
CAAGTCCTGTTTCGACCGAGGTGTTAGGGCTGGCCGGATTTGACTGGTTAGTTCTGGATGGCGAGCACGCACCGAACGAT
ATCACCACGTTTGTTCCCCAGCTAATGGCGCTGAAGGGCAGCCGCAGCGCGCCGGTGGTGCGTCCACCCTGTAATGAACC
GGTCATCATCAAGCGCCTGCTGGATATTGGTTTTAATAACATCCTTGTTCCCTTTGTCGAGAATGAAGACGAAGCCAGAC
GTGCAGTTGCCTCAACGCGCTATCCGCCTGCCGGAATTCGCGGCGTGTCGGTTTCCCATCGCAGCAACATGTACGGCACG
GTGCCGAATTATAACGCCACCATCAACGACAACATTTCGGTGCTGGTCCAAATAGAAACCCAGCAGGCTGTCGACAACAT
TGACGCCATCGCCGCTGTTGACGGCGTGGACGGCATTTTTGTCGGGCCGGGCGATCTCTCTGCCGCTCTCGGCTATCTCG
GACAGCCGGCCCATCCGGAGGTGTTAACGGTCATCAAACACATCTTTGAGCGGGCAAAAGCCGCCAACAAGCCCAGCGGC
ATTCTGGCACCGGTGGAAGCCGATGCCCGTCGCTATCTCGAATGGGGCGCAACCTTTGTTGCCGTTGGCAGCGATCTCGG
TGTTTTCCGCAGTGCCACGCAGGCGTTGTGCGACAAATTTAAAAAGTAA

Protein sequence :
MITSVRAWCVNFFGLPSGSPFHRSQIMSNTAWPNEFRRRLLAGETLIGSWCALASPVSTEVLGLAGFDWLVLDGEHAPND
ITTFVPQLMALKGSRSAPVVRPPCNEPVIIKRLLDIGFNNILVPFVENEDEARRAVASTRYPPAGIRGVSVSHRSNMYGT
VPNYNATINDNISVLVQIETQQAVDNIDAIAAVDGVDGIFVGPGDLSAALGYLGQPAHPEVLTVIKHIFERAKAANKPSG
ILAPVEADARRYLEWGATFVAVGSDLGVFRSATQALCDKFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 1e-43 48