Gene Information

Name : Sked_31880 (Sked_31880)
Accession : YP_003315918.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Virulence
Product : chemotaxis protein CheY
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3548552 - 3549247 bp
Length : 696 bp
Strand : -
Note : PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain

DNA sequence : 
GTGACCCGCATCCTGGTGGTCGAGGACGAAGAGTCCTACCGCGAGCCGCTCACGTACCAGCTGACCCGCGAGGGCTACGA
CGTCGTCGCGGTCGCCGACGGGGCAGCCGGGCTGGCGGCCTACGACGAGGGCGGCGCGGACCTCGTGCTCCTCGACCTCA
TGCTCCCGGGCCTCTCGGGGACCGAGGTGTGCCGTGAGCTCCGTCAGCGCGGCGACGTCCCGGTCATCATGCTCACCGCC
AAGGACGGCGAGATCGACAAGGTCGTCGGGCTCGAGCTGGGCGCCGACGACTACGTGACCAAGCCGTACTCCTTCCGCGA
GCTGCTCGCCCGGGTGCGTGCCGTGCTCCGGCGCCGCCAGCCCGCAGCAGCTGTCGACGAGGACGAGGCCGACGAGCTCG
TCGGCTCCGGCCCGGTGCAGATGGACGTCGACCGGCACGTGGTGACGGTCCGCGGCGAGCTCGTCTCGCTGCCGCTCAAG
GAGTTCGACCTCCTCGAGTTCCTGCTGCGCAACGCCGGCCGGGTCCTGACCCGCGGGCAGCTCATCGACCGTGTGTGGGG
CTCGGACTACGTGGGCGACACCAAGACGCTCGACGTCCACGTCAAGCGCCTGCGCGCCAAGATCGAGACGGACCCGGCCT
CGCCCGAGCTCCTGCTCACGGTCCGCGGCCTCGGCTACAAGCTCGTCGACGACTGA

Protein sequence : 
MTRILVVEDEESYREPLTYQLTREGYDVVAVADGAAGLAAYDEGGADLVLLDLMLPGLSGTEVCRELRQRGDVPVIMLTA
KDGEIDKVVGLELGADDYVTKPYSFRELLARVRAVLRRRQPAAAVDEDEADELVGSGPVQMDVDRHVVTVRGELVSLPLK
EFDLLEFLLRNAGRVLTRGQLIDRVWGSDYVGDTKTLDVHVKRLRAKIETDPASPELLLTVRGLGYKLVDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-19 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_31880 YP_003315918.1 chemotaxis protein CheY AE000516.2.gene3505. Protein 9e-27 49
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_002952.2859905.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_002745.1124361.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_009782.5559369.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_002951.3237708.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_003923.1003749.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_002758.1121668.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_009641.5332272.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_013450.8614421.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_007793.3914279.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_007622.3794472.p0 Protein 2e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_012469.1.7685629. Protein 4e-27 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY HE999704.1.gene2815. Protein 7e-28 48
Sked_31880 YP_003315918.1 chemotaxis protein CheY BAC0308 Protein 5e-19 45
Sked_31880 YP_003315918.1 chemotaxis protein CheY BAC0083 Protein 9e-20 45
Sked_31880 YP_003315918.1 chemotaxis protein CheY NC_012469.1.7686381. Protein 9e-27 45
Sked_31880 YP_003315918.1 chemotaxis protein CheY BAC0347 Protein 1e-16 43
Sked_31880 YP_003315918.1 chemotaxis protein CheY BAC0111 Protein 2e-20 43
Sked_31880 YP_003315918.1 chemotaxis protein CheY BAC0638 Protein 2e-11 43
Sked_31880 YP_003315918.1 chemotaxis protein CheY BAC0197 Protein 2e-20 43
Sked_31880 YP_003315918.1 chemotaxis protein CheY AE016830.1.gene1681. Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_31880 YP_003315918.1 chemotaxis protein CheY VFG1390 Protein 9e-19 44
Sked_31880 YP_003315918.1 chemotaxis protein CheY VFG0596 Protein 6e-20 44