Gene Information

Name : SEEH1578_16300 (SEEH1578_16300)
Accession : YP_008247319.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3288128 - 3288496 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence :
ATGGATTGGGATCTCATTACTGAACGTAATATTCAGCTTTTTATTCAATTAGCAGGATTAGCTGAACGGCCTTTAGCAAC
CAATATGTTCTGGCGGCAAGGACAATATGAAACCTATCTAAACTATCATAACGGTCGTATTCACTTATGTCAGATACTCA
AGCAAACCTTCTTAGACGAAGAACTGCTTTTTAAAGCGTTGGCTAACTGGAAACCCGCAGCGTTCCAGGGTATTCCTCAA
CGATTATTTTTGTTGCGCGATGGGCTTGCAATGAGTTGTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATT
ACATCATCGACAAATAAAATTTCTGGAGTCGCAATGCGTTCATGGTTAG

Protein sequence :
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaM NP_460378.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-53 100
ssaM NP_805084.1 pathogenicity island protein Virulence SPI-2 Protein 3e-52 99
STY1707 NP_456115.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-52 99
ssaM YP_216421.1 secretion system apparatus protein SsaM Virulence SPI-2 Protein 7e-53 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16300 YP_008247319.1 type III secretion system protein SsaM VFG0513 Protein 8e-54 100