Gene Information

Name : YPD4_3156 (YPD4_3156)
Accession : YP_005506363.1
Strain : Yersinia pestis D106004
Genome accession: NC_017154
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4009854 - 4010765 bp
Length : 912 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAGATTAAAACAGATGTCTGTTTTTGCGAAGGTGGTGGAGTGCGGCTCTTTTACTGCCGCAGCACGACGACTGGA
GAACAGTGTCTCTTCCATCAGCCAAACGGTATCAAAACTGGAAAATGAGCTTAACGTTAAGCTACTAAATCGTAGTACTC
GCCGCATTGGCTTAACGGAAGCGGGCCGGATTTATTACCAAGGCTGCCGGCGTATGTTGCAGGAGGTGCAGCAAGTTCAC
GAACAATTGTATGCTTTTAATAATACCCCAACCGGCACATTACGCATTGGTTGCTCCTCCACCATGGCACAAAATGTGCT
GGCCACCATGACAGCCGATATGCTCAAAGCCTATCCCGGTTTATCAGTGAATCTGGTTGCCGGTATTCCTGCACCGGATC
TGATAGCTGATGGCCTGGATGTGGTGATCCGCGTCGGTGCCTTGCAAAACTCAGGGCTGTTTTCGCGCCGCCTCGGTGCT
ATGCCTATGGTGGTGTGTGCAGCAAAAAGTTATTTGTCACAATATGGCACGCCAGCAAAACCCAGTGACATGGCCAATTT
TTCCTGGTTGGAGTATAACGTCCGCCCAGATAGCAATTTTGAGCTGATCGCACCAGAAGGTATCACCACCCAAATATCAC
CGCAGGGCCGTTTTGTCACCAATGACTCACAAACCATGATCCGTTGGTTAAAGGCCGGGGCGGGTATCGCCTATACCCCC
TTAATGTGGGTGATTGAAGAAATTAAACGTGGTGAGGTTGAGATTCTATTTAAACACTATCACTCAGACCCGCGTCCGGT
ATATGCGCTTTATACTGAAAAAGATAAAATGCCACTGAAAGTTCAGGTCTGCATTGATTATTTGACCGAGTATTTCAAAC
GGGTAGCTGATGTTTATCAGGATTATCGCTAA

Protein sequence :
MERLKQMSVFAKVVECGSFTAAARRLENSVSSISQTVSKLENELNVKLLNRSTRRIGLTEAGRIYYQGCRRMLQEVQQVH
EQLYAFNNTPTGTLRIGCSSTMAQNVLATMTADMLKAYPGLSVNLVAGIPAPDLIADGLDVVIRVGALQNSGLFSRRLGA
MPMVVCAAKSYLSQYGTPAKPSDMANFSWLEYNVRPDSNFELIAPEGITTQISPQGRFVTNDSQTMIRWLKAGAGIAYTP
LMWVIEEIKRGEVEILFKHYHSDPRPVYALYTEKDKMPLKVQVCIDYLTEYFKRVADVYQDYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 2e-130 93