Gene Information

Name : Mic7113_3265 (Mic7113_3265)
Accession : YP_007122409.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3741656 - 3742333 bp
Length : 678 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGCATATTCTGTTCGTTGAAGATGAAGCGAAAATTGCTAACTTCGTCCGCTCCGGGTTGAAAGAACAGGGATTTGTTGT
CGATTACTGTGACAACGGAGATGAGGGCTATACTCGCGCCTTGGACAACGAGTATGACGCGCTTGTGCTTGACATCATGG
TGCCAGGAAAAGATGGGTTGTCCATCCTCAAAAATCTGCGCCGGAAAGGACAGAATGTGCCAGTGATTTTACTGACTGCC
CGGAATGAATTGGATGACCGAATTGAAGGTCTAAACTTGGGTGCTGATGATTATTTAGCCAAACCATTTTTCGTTGAAGA
ACTCGTTGCCCGCATTCATGCAGTGGTGCGTCGAACGGCGGGCGATCACCAAAACCTGGTTCGCGTCGGCCCGATCAAGC
TCGATCGCATCACGCGAGAAGTCACTTGCAATCAGCATATTGTAGAACTCACCACCCGCGAGTTCAATCTCTTGGAATAC
CTGATGCGATCGCCTGGACGAGTCTTCACCCGAACCCAAATCCTGGAACACATCTGGGGCTATGATTTCAATCCCAATAC
CAATGTTGTGGATGTGTGCGTTCAACGCATTCGTAAAAAGATTGATTCCATCGGTGGTTCCGGGTGGATTGAAAGCATTC
GAGGCGTTGGCTATCGATTCCGTCAATCAGAGTCTTAG

Protein sequence :
MHILFVEDEAKIANFVRSGLKEQGFVVDYCDNGDEGYTRALDNEYDALVLDIMVPGKDGLSILKNLRRKGQNVPVILLTA
RNELDDRIEGLNLGADDYLAKPFFVEELVARIHAVVRRTAGDHQNLVRVGPIKLDRITREVTCNQHIVELTTREFNLLEY
LMRSPGRVFTRTQILEHIWGYDFNPNTNVVDVCVQRIRKKIDSIGGSGWIESIRGVGYRFRQSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 3e-45 44
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-43 43
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 2e-37 42
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 2e-34 41
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-41 41
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 6e-44 41
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 6e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-37 45
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 5e-40 42
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-42 41
Mic7113_3265 YP_007122409.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 4e-38 41