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Name : Varpa_3272 (Varpa_3272) Accession : YP_004155568.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3522 EC number : - Position : 3524668 - 3526023 bp Length : 1356 bp Strand : - Note : KEGG: bpy:Bphyt_0936 type VI secretion protein, VC_A0114 family; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 DNA sequence : ATGAGTTGGTACAACAAAGTCGCCTGGAGCGAAGGACTCTTCCTGCGCCCGCAGCTGTTCCAGCAGCAGGAGCGCTATCT CGAACACCTCGCGCACAAGCGCACGGCCTCGCTCAGTCCGTTCTACTGGGGCTTCAATCACTACAGCATCGATGCGGAGT CCCTGTCCCTTGGCAAGCTGGTGCTTGCCAGTGCCGCAGGCATTTTTTCGGACGGCACCCCCTTCGACGCCCCCGGCCAG ACGCTGCCGCCCGCGCCGCTCACCATCCAGCCGGAGCATCTGGAGCAGGTCATCCATCTGGCCGTGCCCATTCGCACGCC CAATGGCGAGGAAACGACTTTCGACGACGCGATGGCTGCTGCTGCGTCGCTCGCACGCTTCTCGGTCTTCGACACCGAGT TGCGCGACGCGAATTCCATCGGGCAGGGCCCGAAGACGGTGCAGCTTTCGCGCCTTCGCTTGCGTCTGCTTCCGCAACGG GAGCTGACCGATGCCTGGATCGGTCTTCCGCTCGCCAAGGTGACGGTGCTGCGTTCCGATGGGAGCATCGCCACCGATCC GTATCTGATCCCGCCCGTCGCCGGCTACGGTGCGAGCCCGCTGCTGGCCGACTGGATGACGAATCTGCACGGCCTGTGCC GTCTCCGCGCGCAAACGCTCGCGGCACGGCTCAGCGGCAATGACGGCAAGTCGAGCGAATCGGCCGAAGTGTCCGATTTC CTGCTGCTGCAGATACTCAATCGCTACGAGCCCTTGTTCGAGCACTGGCTGCGTGTGCGAGAGACCTCGCCGGAGGTGCT GTACACCGCCTTGTGCTCTCTCAGCGGAGAGCTTGCGACGTTCGTGCGGGCGAGCACGCGTCGCCCCACCGAGCACCCGG CCTATCGGCACATCGATCCGTGTTTGTCTTTCAGGGGGCTGATAGCCGATGTACAGGCCTTGCTCAACGATGTACTGGTT CGCAGTGCGCAAAGTATTCCCCTCGCCAATCGCGCCAACGGCGTGCGCGTGGCAAGCGTCGAGCCCTCGGAGCTGCAAGG CTTCTCGAGCCTCGTGTTCGCCGTGGCGGCTCATACACCGCCCGATCAGCTGGCCAGCGAGTTTCCGGCGCGCTGCAAGG TCGGGCCGAGCGATCGGCTCGGCGAACTCATCCGCTCGCATCTGCCCGGCATTCCGCTGCAAACGCTGCCGGTGCCGCCG CGCCAGATCCCTTTCAACGCGGGCTTTGTCTACTTTCAGATCGACTCGCGCGGGCCGTTGTGGGAGCACATGGTCAAGCA CGGTGGACTGGCGTTGCATGTGGCGGGTGAGTTCCCTGGTTTGCGTCTTGAGCTCTGGGGCATCCGAGAGAAATGA Protein sequence : MSWYNKVAWSEGLFLRPQLFQQQERYLEHLAHKRTASLSPFYWGFNHYSIDAESLSLGKLVLASAAGIFSDGTPFDAPGQ TLPPAPLTIQPEHLEQVIHLAVPIRTPNGEETTFDDAMAAAASLARFSVFDTELRDANSIGQGPKTVQLSRLRLRLLPQR ELTDAWIGLPLAKVTVLRSDGSIATDPYLIPPVAGYGASPLLADWMTNLHGLCRLRAQTLAARLSGNDGKSSESAEVSDF LLLQILNRYEPLFEHWLRVRETSPEVLYTALCSLSGELATFVRASTRRPTEHPAYRHIDPCLSFRGLIADVQALLNDVLV RSAQSIPLANRANGVRVASVEPSELQGFSSLVFAVAAHTPPDQLASEFPARCKVGPSDRLGELIRSHLPGIPLQTLPVPP RQIPFNAGFVYFQIDSRGPLWEHMVKHGGLALHVAGEFPGLRLELWGIREK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0304 | NP_454884.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 1e-119 | 57 |
