Gene Information

Name : SPAB_03343 (SPAB_03343)
Accession : YP_001589534.1
Strain : Salmonella enterica SGSC4150; SPB7
Genome accession: NC_010102
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2798315 - 2798692 bp
Length : 378 bp
Strand : +
Note : COG: NOG14666 non supervised orthologous group; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGCAGATTTTACCCTCACTCCCGCCCGGGGCGACTTCGTCACACCCCACGCCTGTCGGCATCTGGCAGACCCTGCTGTC
GCATCTGCTGCAACAACACTACGGTCTGATGCTGAACGACACCCCGTTTGCTAACGACGGCGTCATTGAGCAGCATATCA
ACGCCGGCATCTCCCTGTGCGATGCGCTGAACGGTATTGTTGAAAAATATGACCTGGTCCGGACCGACCGCCCGGGATTC
AGTATTGCAGTGCAGTCTCCGTTCATTACCCGTATCGATATTCTCCGCGCCAGAAAAGCCTGTGGCCTGATGAAACGTCG
TGGCTACCGGGCCGTTACCGACATCACCACCGGCAGATACAGCGGGGTGGCACGATGA

Protein sequence :
MQILPSLPPGATSSHPTPVGIWQTLLSHLLQQHYGLMLNDTPFANDGVIEQHINAGISLCDALNGIVEKYDLVRTDRPGF
SIAVQSPFITRIDILRARKACGLMKRRGYRAVTDITTGRYSGVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 1e-33 64
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 1e-32 64
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 1e-32 64
yeeV AAZ04461.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-33 64
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 8e-34 63
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-32 63
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 1e-32 63
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 4e-33 62
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 2e-33 62
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 2e-32 61
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 1e-33 61
unnamed AAL08478.1 unknown Not tested SRL Protein 2e-32 61
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 2e-33 61
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 2e-33 61
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 1e-32 61
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-33 61
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 6e-32 61
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 3e-32 61
unnamed AAC31486.1 L0007 Not tested LEE Protein 2e-32 61
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 3e-32 61
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 6e-33 60
unnamed AAL57575.1 unknown Not tested LEE Protein 2e-31 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAB_03343 YP_001589534.1 hypothetical protein VFG1530 Protein 4e-34 64
SPAB_03343 YP_001589534.1 hypothetical protein VFG1620 Protein 4e-33 61
SPAB_03343 YP_001589534.1 hypothetical protein VFG1682 Protein 3e-32 61
SPAB_03343 YP_001589534.1 hypothetical protein VFG1069 Protein 7e-33 61
SPAB_03343 YP_001589534.1 hypothetical protein VFG0663 Protein 6e-34 61
SPAB_03343 YP_001589534.1 hypothetical protein VFG0786 Protein 8e-33 61