Gene Information

Name : Franean1_3390 (Franean1_3390)
Accession : YP_001507698.1
Strain : Frankia sp. EAN1.pec
Genome accession: NC_009921
Putative virulence/resistance : Unknown
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4016135 - 4016815 bp
Length : 681 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sco:SCO7088 two-component system response regulator

DNA sequence :
ATGACTATCCGAGTGCTCCTCGCCGACGACCAGACCCTCCTACGGGCAACCTTCCGGATTCTGATCGACTCCTGCAGCGA
CATGGAGGTCGTCGGTGAGGCCGCGGACGGGCACGAGGCCGTCGCGGCGACCCGGGAGCACCGCCCGGACGTCGTGGTCA
TGGACATCCGCATGCCCGGCACCGACGGGCTCGCCGCCACCGCCGCCATCTGCGGCGACGAGACGCTGGCGGCCACCCGT
GTCCTGATCCTCACGACCTTCGAGATCGACGAGTACGTGGCCCAGGCGCTCCGCGTCGGCGCGAGCGGCTTCCTCGGCAA
GGACGTCGGAACGGACGAGCTGCTCTCCGCCATCCGCACCGTCGCCGGCGGCGACGCGCTTCTCTCGCCGGCGGCCACCC
GTGTCCTCATCAGCCGTTTCCTCGCCACCCCGGAGCCCGCGGCCACCGCCACGGTCAATCCCGTGGCGCTCGCCGCGCTC
ACCGCTCGCGAACGCGAGGTCATGGCGCTGGTGGCCGAAGGCTACTCGAACCACGAAATCGCCGACCGGCTTGTCATCAG
CCCACTGACCGCCCGCACGCACGTCCACCGGGCCATGGCGAAGCTCAACGCCCGCGACCGGGCGCAGCTGGTCGTCATCG
CGTACCAGTCCGGCCTGCTGCAAACCGCTCGACCGGACTGA

Protein sequence :
MTIRVLLADDQTLLRATFRILIDSCSDMEVVGEAADGHEAVAATREHRPDVVVMDIRMPGTDGLAATAAICGDETLAATR
VLILTTFEIDEYVAQALRVGASGFLGKDVGTDELLSAIRTVAGGDALLSPAATRVLISRFLATPEPAATATVNPVALAAL
TAREREVMALVAEGYSNHEIADRLVISPLTARTHVHRAMAKLNARDRAQLVVIAYQSGLLQTARPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 4e-37 48