Gene Information

Name : MXAN_3450 (MXAN_3450)
Accession : YP_631647.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4017712 - 4018392 bp
Length : 681 bp
Strand : +
Note : identified by similarity to SP:Q02540; match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
GTGAGGCTGCTGCTGGTGGAAGACGAGGAGCGGATGGCGAACCTGCTCCGGCGGGGGCTCGGGGAAGAGGGCCACCTCGT
GGACACCTGCCGCACGGCGGAAGACGCGCTCGACCAGGCAGGCGAGGTTGCCTACGACGCCATCATCCTCGACTGGGCCC
TGCCTGGCATGGATGGCGTCGCGCTGCTGCGGCGCTGGCGCGAACGCGGCTTGATGACGCCGGTGCTGATGCTCACCGCC
CGCGGCACGGTGGGGGAGCGGGTGACGGGCCTGCGCGCTGGCGCGGATGACTACCTGGTGAAGCCCTTTGCCTTCGAGGA
ACTGCTCGCGCGCCTGGAGGCGCTGCACCGCCGCTCCGAGGGCCAGACGCAGTCCTGGGGCGGAGGGGCCATCCACATCG
ATGCCCGGCGGCGGATGTTGACGTGTGGCGACCGTGAGGTGGCCTTGACGGGCCGCGAGTTCGCCCTGCTGGGTGAGCTG
GCTTCGCGCGCGGGCGAAGTCCACACCCGCTCCAGCCTGCTGGCGAAGGTGTGGGGCCCCAGCTTCGATGGGCCTCCCAA
CATCGTGGACGTCTACGTGGGCTACGTGCGCACGAAGCTGACCGAGGTGGGCGCGGAAGGGGTGACCATCCAGGCGGTGC
GTGGCGTGGGCTTCCGGTTGGTGATTGAGGGCGCTCGGTGA

Protein sequence : 
MRLLLVEDEERMANLLRRGLGEEGHLVDTCRTAEDALDQAGEVAYDAIILDWALPGMDGVALLRRWRERGLMTPVLMLTA
RGTVGERVTGLRAGADDYLVKPFAFEELLARLEALHRRSEGQTQSWGGGAIHIDARRRMLTCGDREVALTGREFALLGEL
ASRAGEVHTRSSLLAKVWGPSFDGPPNIVDVYVGYVRTKLTEVGAEGVTIQAVRGVGFRLVIEGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-20 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator BAC0083 Protein 7e-23 45
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator BAC0125 Protein 6e-23 43
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator BAC0197 Protein 9e-20 43
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator NC_002516.2.879194.p Protein 6e-19 42
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator BAC0638 Protein 5e-16 42
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator BAC0308 Protein 2e-20 41
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator HE999704.1.gene1528. Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator VFG0596 Protein 8e-21 42
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator VFG1390 Protein 2e-22 42
MXAN_3450 YP_631647.1 DNA-binding heavy metal response regulator VFG1389 Protein 2e-24 42