Gene Information

Name : REQ_36080 (REQ_36080)
Accession : YP_004008276.1
Strain : Rhodococcus equi 103S
Genome accession: NC_014659
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3856099 - 3857592 bp
Length : 1494 bp
Strand : -
Note : -

DNA sequence :
ATGACAGTCGTTGCCGAGCAGACCCTTTCGCCGCGAGTTCGCGAGTTCCTCGCCGGCACCAAGCAGTTGTACATCGACGG
CGAGTTCGTCGACGCTGCGTCGGGGCGGACGTTCGTCACGTACGACCCCGCGACGGGCGAGCGCCTCGCCGACGTCGCAC
ACGGGGAGGCCGAGGACGTCGACCGCGCGGTGCGCGCGGCACGACGGGCTTTCGAGCCGTGGGCCGCGATGAAGCCCAAC
GAGCGCGAGCGTCTCATCTGGCGGGTCGGCGACCTGCTCACCGAGCGTGCGGCGGAGTTCGGGCAGCTCGAGGCGCTCGA
CAACGGCAAGTCCGCCGCCATCGCATCGGCCGTCGACACCGCGTGGGCTGCGGACGTGTTCCGCTACTACGCGGGCTGGG
CCACCAAGATCGAGGGCAGCACCGTCAACGTGTCGATGCCGTTCGTTCCGGGCGGCGAGTTCCACGCCTACACCCTCCGC
GAACCCGTCGGGGTGTGCGGGCTCATCGTGCCGTGGAACTTCCCGCTGCTGATGGCGTCGTGGAAGCTCGCCCCCGCACT
CGCGGCCGGCAACACGGTGATCCTCAAGCCTGCGGAGCAGACCCCGCTCACCGCGCTCATGCTGGCCGAGGTCTTCGAGG
AGGCCGGCTTCCCGCCCGGTGTCGTCAACGTCGTCACGGGGTTCGGCGACGCCGGCGCCGCCCTGTCGGCGCACGACGAC
GTCGACAAGGTGGCATTCACCGGCTCCACCGAGGTGGGCAAGAAGATCGTCGAGGCGGCCAAGGGCAACCTGAAGAAGGT
GACTCTCGAGCTCGGTGGCAAGAGTCCCAACATCGTCTTCGCGGACGCCGATTTCGATGCGGCCGTGCAGGGTTCGCTCA
ACGCGTGGCTGTTCAACCACGGCCAGTGCTGTGTCGCGGGTACGCGACTGTACGTCGAGAACTCCATCTTCGAGCGTTTC
ACCGAGGCCGTCGCGGAGGCCGCGAGCAACGTCAAGATCGGGCCCGGGCTCGACCCCACCACCGAACTCGGCCCGCTGGT
GTCGCAGGAACAGCTCGACCGGGTCACCGGATACCTGCGCGACGGTCTCGCCGACGGCGCCCGTGCCCTGACCGGCGGCA
AGCGCTGGGGCGAGACGGGCTACTTCGTCGAGCCCACGGTGCTGGTCGACGTCGAACCCGACTTCAGTGTCGTCCGGGAG
GAGATCTTCGGACCCGTCGTCGCGGCCATGCCGTTCGATGCCGACGAGGGGATCGTCACCGCCGCCAACGACTCGATCTA
CGGACTCGCGGCCGGCATCTGGACCCGGGACATCTCCAAGGCGCATCGCACCGCGCGCCGCCTGAAGGCCGGCTCGGTGT
GGATCAACCAGTACAACGGGTTCGACACCGCGATGCCGTTCGGTGGCTACAAGCAGTCCGGCTGGGGCCGTGAGCTCGGC
GCCTCCGCCATCGACCTCTACACCCAGACCAAGGCCGTCAACGTCGCGCTCTGA

Protein sequence :
MTVVAEQTLSPRVREFLAGTKQLYIDGEFVDAASGRTFVTYDPATGERLADVAHGEAEDVDRAVRAARRAFEPWAAMKPN
ERERLIWRVGDLLTERAAEFGQLEALDNGKSAAIASAVDTAWAADVFRYYAGWATKIEGSTVNVSMPFVPGGEFHAYTLR
EPVGVCGLIVPWNFPLLMASWKLAPALAAGNTVILKPAEQTPLTALMLAEVFEEAGFPPGVVNVVTGFGDAGAALSAHDD
VDKVAFTGSTEVGKKIVEAAKGNLKKVTLELGGKSPNIVFADADFDAAVQGSLNAWLFNHGQCCVAGTRLYVENSIFERF
TEAVAEAASNVKIGPGLDPTTELGPLVSQEQLDRVTGYLRDGLADGARALTGGKRWGETGYFVEPTVLVDVEPDFSVVRE
EIFGPVVAAMPFDADEGIVTAANDSIYGLAAGIWTRDISKAHRTARRLKAGSVWINQYNGFDTAMPFGGYKQSGWGRELG
ASAIDLYTQTKAVNVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-74 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-73 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-75 41
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-62 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REQ_36080 YP_004008276.1 aldehyde dehydrogenase VFG0082 Protein 2e-75 41