Gene Information

Name : PSEEN3704 (PSEEN3704)
Accession : YP_609212.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3978754 - 3979434 bp
Length : 681 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator

DNA sequence : 
ATGAAATTACTGATCGTCGAAGACCAGGCCAAGACCGGCCAATACCTGTGCCAGGGCCTGAGCGAGGCCGGTTTCGCCAC
GGAGCTGGCCACCGACGGCGACACCGGCCAGCACCTGGCGCTGACCGGTGACCACGACCTGTTGATCCTCGACGTGATGC
TGCCGGGGCGCAACGGCTGGCAGATTCTCCAGAGCGTGCGCCAGGCCGGGCTGGACACGCCCGTGCTGTTCCTCACCGCC
CGCGACGCGGTCGAGGACCGCGTGCACGGCCTCGAGCTGGGCGCCGACGACTATCTGGTCAAGCCTTTCGCCTTCTCCGA
ACTGCTGGCACGGGTGCGCAGCCTGCTGCGCCGGGGCGCCAACGCCAGCCAGGACACCCACCTAGCGCTTGCCGACCTGC
GCCTGGACCTGATCCGCCGCCGTGCCGAGCGCAGCGGCCAGCGCATCGACCTGACCGCCAAGGAGTTCGCCCTGCTCGAA
CTGCTGCTGCGCCGCCAGGGCGAAGTGTTGCCCAAATCGCTGATTGCCTCGCAGGTGTGGGACATGAATTTCGACAGTGA
TACCAATGTGATCGAAGTGGCCATCCGCCGCCTGCGCCTGAAGATCGACGACAGCCATCCCACCAAGCTGATCCACACCG
TGCGCGGCATGGGCTACGTGCTCGAGGAGCGGCAGGACTGA

Protein sequence : 
MKLLIVEDQAKTGQYLCQGLSEAGFATELATDGDTGQHLALTGDHDLLILDVMLPGRNGWQILQSVRQAGLDTPVLFLTA
RDAVEDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGANASQDTHLALADLRLDLIRRRAERSGQRIDLTAKEFALLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRLKIDDSHPTKLIHTVRGMGYVLEERQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-49 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-49 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0638 Protein 6e-60 69
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0083 Protein 3e-64 68
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0197 Protein 3e-60 67
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0111 Protein 3e-64 65
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0308 Protein 1e-59 61
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0347 Protein 2e-57 60
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator BAC0125 Protein 2e-57 59
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator NC_002516.2.879194.p Protein 5e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator VFG0596 Protein 4e-50 54
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator VFG1390 Protein 2e-35 44
PSEEN3704 YP_609212.1 DNA-binding heavy metal response regulator VFG1389 Protein 7e-30 41