Gene Information

Name : YPTS_0337 (YPTS_0337)
Accession : YP_001870783.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : YscD/HrpQ family type III secretion apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 376768 - 377979 bp
Length : 1212 bp
Strand : +
Note : TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family; KEGG: ypg:YpAngola_A3942 type III secretion apparatus protein, YscD/HrpQ family

DNA sequence :
ATGACCACCGTATTCAAGCTTCGCCTGTTAAATGGTGATCTCAATGGTCGTGAGCTGATATTACCGGAAGGTGAATTTAC
ACTGGGGGAGCAGGGGTGTGATGTTCTGCTGCCTTTATCTGACGGCAATATAGTGACGCTATGTGTTAATGAATATCAGG
TAATGATACAGGTGGCGGAGGAGGTTTGGATTAATGGTGCACAGCACGATTTACACACTCCCCTTCCACTGTTGCAATCT
ATTGAAATTGCCGGATTGGTATTCGTTCTGGGTGAACAAACGGATATTTTGAGTGGAATTAAAGTCACTCACCGTGCGAG
GTTCCCTTTATTGGTATGGCTAGCTATTGCGATATGTGTCCCCTTATCACTGCTGTTTGTTTTTTTATTTTGGTTAACCA
CTCAGCCTGAGACATTACGTGCTTCGATTCCTGCGGATGTCCCGACGCAATTAGCCGAACGCCTGCGCGAACCCGCTTTA
CAGGGAATAAAGGGAACCTGGCTAGCGGATGGGAGTGTCACATTAAGTGGGCATTGTGCCTCGTCCTCAATGATGGAACC
ACTGCAACATTTTTTACTGCGTAACCATATCGCCTTTCGTAACCAATTGGTGTGTGATGATCGCTTAATCGCTTCCGTTA
GCGATCTATTACATCAGCATGGTTACCACGATATTGAGGTGCGCATCGGTGATGAACCGGGAAATATTGTGATTTATGGT
GCCGTTCAAATGGGTGATCAGTGGTTAACCGTGCAGGACACGCTGGCGGCGGTTTCAGGGTTGAAAGGTTGGCTGGTGGT
CAATGCTCATTCAGGGCAAATACAACAACTGGTGGAGCGCTTGAGAGCGGCAGGCTTATTAGGATTCTTAAGCATGACGG
AAAGTAATAAAGAGTTGGCCATCAGTGGTGTGCTGTCATCTGAACAGCAGCAGTTAAAGGAGACATTGGCCGCTTTATCT
CAGCAGCAACCCGGTTTTCCGTCAGTCAGGTATCAGAATATTCCGGCGTCAGACCGAACGGATCAATTTCTTCCGGCAAA
GGTCGTGAGCTATGGAGGAAATACCCAGTCGGCATTTGTGCGGTTAGCCAATGGTGGGCGTTTGCAGCAAGGGAGCGTGT
TGGCAAATGGCTATAAAGTGGTTTTTATTGGGGAACAGGGACTGACGTTATTAAAAGCAAATAATTTAGTACATATCCCC
ATGGATTTCTAA

Protein sequence :
MTTVFKLRLLNGDLNGRELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVMIQVAEEVWINGAQHDLHTPLPLLQS
IEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLAIAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERLREPAL
QGIKGTWLADGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGNIVIYG
AVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTESNKELAISGVLSSEQQQLKETLAALS
QQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNTQSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANNLVHIP
MDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0258 YP_002345338.1 type-III secretion protein Virulence Not named Protein 0.0 99