Gene Information

Name : YPN_3497 (YPN_3497)
Accession : YP_649424.1
Strain : Yersinia pestis Nepal516
Genome accession: NC_008149
Putative virulence/resistance : Virulence
Product : insecticidal toxin
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3209
EC number : -
Position : 3985638 - 3988595 bp
Length : 2958 bp
Strand : +
Note : -

DNA sequence :
ATGTGGAGCGCACTCGCCTGGCGATGGTGCGCTGTAATGCTAACCGGGAGTCAGCGTTACGCTTTTTGCAACGATAGATT
TCACAACCGTAAAATAACTCGTTTAAGGAATAATTTTATGCCCAATATATTACCCACTGATCTGTGCGCCAACACCCCCA
CCCTCGCCATCCACGATAACCGGGGGTTCGCTATTCGCACACTGGCTTATAACCGCCGCGATCATAATGAAACCATTGGC
GAACTGATCAGCCGCAACCGCTATAACGCCTCCGGTCAGCTAATCGCCAGCCGCGACCCGCGCCTTGAGGTGGATAATTT
CCGCTATCAATACAGCCTCAGCGGTGTTCCACTGCGCACCGACAGCGTCGATAGCGGCAGTACACTGCAACTGGCAGATA
GTGCTGGCCGCACGGTGCTCACGCTCGATGCACACCACACCCGCCGCTGGGTGGAGTATGAGACCGGTGAACACAGTTTA
GGCCGCCCGCTAAGTTACCACGAGCAAGCCAAAGGCGGCCTGAAAACAGTTACCGACCGCTTTTTCTATGCCACAAACAG
CGAGCAGGATAAAAGCGGCAATCTGAACGGCCAGTGTGTACGCCATTACGACAGCGCCGGTTTGCAGGCACTGATTAACC
AGTCGATTATTGGCGTACCACTGCAACAACAGCGCCGTCTACTGACGAATCCCAAAGGCCCAGTTGACTGGTTTGGCGAA
AAGGAAAACTGGGGCGCTCGCCTGAGCGAACAGCCGTTTGTTAGCCATAGCACCACCGATGCTCTCGGCCAGTTACTCAC
GCAAACCGATGCCAAAGGCCATATCCAGCGCATGGCCTATAACCGCGCCGGACAACTTATCGGTTCGTGGCTAACAATAA
AAAATAGCGCTGAACAGGTGATCCTCCGTTCACTCACCTATTCGGCTGCTGGGCAAAAACTGCGCGAAGAGAGCGGCAAC
GGGGTGATTACCGAATACCGTTATGAACCCCAGACTCAGCGCTTAATCGGCATTAAAACCACCCGCCCGGCGAAGAAAGA
CCGCCCGACCCGGTTACAAGACCTGCGTTACGATTATGACCCGGTCGGGAATATTCTCGCCATCCATAATGACGCCGAAG
CCACCCGCTTCTACCGTAATCAGAAAATCGTGCCGGAAACCACTTACCGCTACGATGCACTGTATCAGCTTATCGAGGCC
ACCGGCCGTGAAGCGGATACCAACGGCATACAAAACAGCCAGTTACCCGCACTGGCGTCACTGAACGACAGCAACCAGTT
CGTCAACTACACCCGCAGCTACCACTATGACCGCGCCGGTAATCTGCTGAAAATACAGCATACCGGTGCCAGCCAATACA
GTACCCATATCACGGTGTCCGATTCGTCCAATCACGGCATTCAGCAACAAGAGGGTATCACCGCCCGTGATATTCGCTCC
CAGTTTGATGCGGCGGGTAATCAGCAACAACTGCAACCCGGTCAGCCCCTGCGCTGGAACAGCCGCAATCAGTTACAGCA
GGTGGAACCCGTGCCCCGCAACGATGGCATCAGTGACAGCGAAAGTTATCTCTATGATGGTGGCGGTAGCCGGGTGGTCA
AAACCAGTCTCCATAAAACCCATAACGCCATCCAAACCCGTTCAGTCATTTATTTAGCGGGACTGGAACTGCGTAGCCAA
TATAATGGCAATAATCTGACAGAAGATTTTCAGGTGATAACCGTGGGTGCCGCGGGCCGTGCTCAGGTACGGGTATTACA
CTGGGAGCGCGGCCAACCCGTTGATATCGTCAATGACCAACTGCGTTACAGTTTCGATAATCACCTTGGCTCGGCGTTAA
TCGAATTAGACAGCGATGGCGATATTATCAGCCAGGAAGAATATTACCCATTTGGCGGTACCGCGGTGTTAGCCTCCCGC
AATACCGTGGAAGCCAAATATAAAACCGTTCGTTACTCCGGTAAAGAGCGTGACGCCACCGGGCTGTATTATTATGGTTA
CCGTTATTACCAGCCGTGGCTGGGCCGCTGGTTAAGCGCTGACCCCGCAGGCACTATAGACGGACTGAATTTATATCGGA
TGGTGAGGAATAATCCGGTGGGGTTGATGGATGGGGATGGGTTAATGACCGATAAGCTTCTTGCTAAACATGAAGCAAAT
TTTGCAAAAAAAAACATATCATCTATGGCTGAATTAAAATCAGAAATAGAAAAACTCGGTCTGCTCCCTGCTGATAGTAA
GCAATTATTCTTGCATTTAAATGGTGGTGAATCTGACGATGAACCCTCTGGTTCTTCCGGTTCTTCCGGTTCTTCCGGTT
CTTCTGAAATATTAGAGAATACTTCACCCCACAAAATAAAAAACTTCCATTTCATTAGCGAAATAAATCTAGCCACCATG
CCCAGACCTTATTATAAAGACTTTTCCAGCACAGAGGATATGTTGGAGTCTGCAGAGAGACTTAAAGCATATGGTTCAAT
AGATACGCTGTTGACACTAGATTTAACCAGTGAAGATATTCCTGAATTTACGTCAATATTAGCCGATAAAGGAATAAATT
ATATAGCAGAAAAACAATATGAAATAATTGATTACTTTAGCGAAGATGAATTATCCTCAGAAAATATAGACCGTATCGTC
AACATGATAAAAACAATTCAAAATAACAACCACAAAGTAGGTATACATTGCGCAGCAGGAAATGGCCGCAGTGGACTTAT
TGCCACCGCCATGATAATAAACAAAAAATACACACAAAGTCGTATAAATAGCTTTGAAGAAAAAAACAAATTAAAGGAAA
TAATTGATAAGAATAAAAATGAAATAAATGTTGATGCTATTACTTATGATGCAATGAAATTAGTAAGGAAAACAAATCCC
TTTGCCGGAGAGCGAACAACTGACATAAAAGCAGCACGTGAATACTCACGTTATTTATATAGCAAACAGAATCGATAA

Protein sequence :
MWSALAWRWCAVMLTGSQRYAFCNDRFHNRKITRLRNNFMPNILPTDLCANTPTLAIHDNRGFAIRTLAYNRRDHNETIG
ELISRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLRTDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHSL
GRPLSYHEQAKGGLKTVTDRFFYATNSEQDKSGNLNGQCVRHYDSAGLQALINQSIIGVPLQQQRRLLTNPKGPVDWFGE
KENWGARLSEQPFVSHSTTDALGQLLTQTDAKGHIQRMAYNRAGQLIGSWLTIKNSAEQVILRSLTYSAAGQKLREESGN
GVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEA
TGREADTNGIQNSQLPALASLNDSNQFVNYTRSYHYDRAGNLLKIQHTGASQYSTHITVSDSSNHGIQQQEGITARDIRS
QFDAAGNQQQLQPGQPLRWNSRNQLQQVEPVPRNDGISDSESYLYDGGGSRVVKTSLHKTHNAIQTRSVIYLAGLELRSQ
YNGNNLTEDFQVITVGAAGRAQVRVLHWERGQPVDIVNDQLRYSFDNHLGSALIELDSDGDIISQEEYYPFGGTAVLASR
NTVEAKYKTVRYSGKERDATGLYYYGYRYYQPWLGRWLSADPAGTIDGLNLYRMVRNNPVGLMDGDGLMTDKLLAKHEAN
FAKKNISSMAELKSEIEKLGLLPADSKQLFLHLNGGESDDEPSGSSGSSGSSGSSEILENTSPHKIKNFHFISEINLATM
PRPYYKDFSSTEDMLESAERLKAYGSIDTLLTLDLTSEDIPEFTSILADKGINYIAEKQYEIIDYFSEDELSSENIDRIV
NMIKTIQNNNHKVGIHCAAGNGRSGLIATAMIINKKYTQSRINSFEEKNKLKEIIDKNKNEINVDAITYDAMKLVRKTNP
FAGERTTDIKAAREYSRYLYSKQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tccC CAI77380.1 putative insecticidal toxin complex protein Not tested tc-PAIYe Protein 0.0 68
TccC3 AAO17204.1 TccC3 Virulence tcd island Protein 7e-154 53