Gene Information

Name : YPN_3498 (YPN_3498)
Accession : YP_649425.1
Strain : Yersinia pestis Nepal516
Genome accession: NC_008149
Putative virulence/resistance : Virulence
Product : insecticidal toxin
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3209
EC number : -
Position : 3988620 - 3991478 bp
Length : 2859 bp
Strand : +
Note : -

DNA sequence :
ATGTCCACAAGTTTACCAACCCAGCTTTGCGCCAACACCCCCGCCCTCACCATCCACGATAACCGGGGGTTAGCTATTCG
TACACTGGCTTATAACCGCCGCGATCATAATGAAACCGTTGACGAACTGATCAGCCGCAACCGCTATAACGCCTCCGGTC
AGCTAATCGCCAGCCGTGATCCGCGCCTTGAGGTGGATAATTTCCGCTATCAATACAGCCTCAGCGGTGTTCCACTGCGC
ACCGACAGCGTCGATAGCGGCAGTACACTGCAACTGGCAGATAGTGCTGGCCGCACGGTGCTCACGCTCGATGCACACCA
CACCCGCCGCTGGGTGGAGTATGAGACCGGTGAACACAGTTTAGGCCGCCCGCTAAGTTACCACGAGCAAGCCAAAGGCG
GCCTGAAAACGGTTACCGACCGCTTTTTCTATGCCACAAACAGCGAGCAGGATAAAAACTGCAACCTGAACGGCCAGTGT
GTACGCCATTACGACAGCGCTGGTTTGCAGGCACTGATTAGCCAGTCGATTATTGGCGTACCACTGCAACAACAGCGCCG
TCTACTGACGAATCCCAAAGGCCCAGTTGACTGGTTTGGCGAAAAGGAAAACTGGGGCGCTCGCCTGAGCGAACAGCCGT
TTGTTAGCCATAGCACCACCGATGCTCTCGGCCAGTTACTCACGCAAACCGATGCCAAAGGCCATATCCAGCGCATGGCC
TATAACCGCGCCGGACAACTTATCGGTTCGTGGCTAACAATAAAAAATAGCGCTGAACAGGTGATCCTCCGTTCACTCAC
CTATTCGGCTGCTGGGCAAAAACTGCGCGAAGAGAGCGGCAACGGGGTGATTACCGAATACCGTTATGAACCCCAGACTC
AGCGCTTAATCGGCATTAAAACCACCCGTCCGGCGAAGAAAGACCGCCCGACCCGGTTACAAGACCTGCGTTACGATTAT
GACCCGGTCGGGAATATTCTCGCCATCCATAATGACGCCGAAGCCACCCGCTTCTACCGTAATCAGAAAATCGTGCCGGA
AACCACTTACCGCTACGATGCACTGTATCAGCTTATCGAGGCCACTGGCCGTGAAGCGGATACCAACGGCATACAAAACA
GCCAGTTACCCGCGTTGGCGTCACTGAACGACAGCAACCAGTTCGTCAACTACACCCGCAGCTACCACTATGACCGCGCC
GGTAACCTGCTAAAAATTCAGCATACCGGTGCCAGCCAATACAGTACCCATATCACGGTGTCCGATTCGTCCAATCACGG
CATTCAGCAACAAGATGGCATCATCGCCCGTGATATTCGCTCCCAGTTTGATGCGGCGGGTAATCAGCAACAACTGCAAC
CCGGTCAGCCCCTGCGCTGGAACAGCCGCAATCAGTTACAGCAGGTGGAACCTGTGCCCCGCAACGATGGCATCAGTGAC
AGCGAAAGTTATCTCTATGATGGCAGCGGTAGGCGGGTGGCCAAAATCAGTCTCCATAAAACCCATAACGCCATCCAAAC
CCGTTCGGTCATTTATTTAGCGGGACTGGAACTGCGTGGCCAACATAATGACAATAATCTGACAGAAAGTTTTCAGGTGA
TAACCGTGGGTGCTGCGGGCCGTGCTCAGGTACGGGTATTACACTGGGAGAGCGGCCAACCCGTTGATATCGTCAATGAC
CAACTGCGTTACAGTTTCGATAATCACCTTGGCTCGGCGTTAATCGAATTAGACAGCGATGGCGATATTATCAGCCAGGA
AGAATATTACCCATTTGGCGGTACCGCGGTGTTAGCCTCCCGTAATACCGTGGAAGCCAAATATAAAACCGTTCGTTATT
CCGGTAAAGAGCGCGATGCCACCGGGCTGTATTATTATGGTTACCGTTATTACCAACCGTGGCTGGGCCGATGGTTAAGC
GCCGACCCCGCAGGCACTATAGACGGACTGAATTTATATCGGATGGTGAGGAATAACCCAATCAGATGGCGTGATAACAA
TGGGCTATTAACCGAAGAGCAAATTAATATGTACGTTAATTTGTTTAGTAATATTGGATTAAAAAATGATGATGAATTAA
AGAGTGAATTATTAAAATATGGTTTAAGTGAAGAAGAGCAAAACCAGATATACCTTAATATGTTAAGACCTATGCAGTCT
GGATCATCAAGCTCATTATTCTCCTTCCCTTCTGAAAGTAGTTCAAGTTCTGGGAGTACGCAAAGTGTTGATTCAGGTTA
TCTCAGTCCAGTAAGAAACTATCATTTTTTTGAAGATATTAAGTTAGCAACAATGCACCGTCCCTATCCAAAAAAACAAG
CCTCTAGTGACACAATAACATATTCAGCAGAAGATTTAACAGAAGCTAGCCCTATAAAAATTCTCATTGGTTTGGATTTG
ACCAGTAAAAACACCCAACCATATAAGTCAGCGCTTGCCGAAAAAGGAATTAAGTATATCACTAAAGAAAAATATGAAAT
AACAGACTTTTTTGAAGAAGGAGGATTATCGACTGAACAAATAGATTTAACAGTAAATAAAATATTAAAATTACAAAAAA
AGGATCTTGTAGGAATTCATTGTGGGGCAGGTAATGGAAGAAGTGGAGTTATTGCATCAGCATTATCCATTAATAAACAG
TATACAACAGATAAAATAAATAGTTTTGACGTAACTCATTCATTAAGAGGGTCAATACTTAAAGACACACAAACATACCA
AGTGGATACGGTAACCGCCAAGGCGGTTGGGATTATCAGAGAAATAAATCCTAAAGCAGTGGAACGTAATCAGGATGTTA
TTTCCCTATATAGATATTCTCATTTTTTATATACAAGAAAACACACTACATCATTATAA

Protein sequence :
MSTSLPTQLCANTPALTIHDNRGLAIRTLAYNRRDHNETVDELISRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR
TDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHSLGRPLSYHEQAKGGLKTVTDRFFYATNSEQDKNCNLNGQC
VRHYDSAGLQALISQSIIGVPLQQQRRLLTNPKGPVDWFGEKENWGARLSEQPFVSHSTTDALGQLLTQTDAKGHIQRMA
YNRAGQLIGSWLTIKNSAEQVILRSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDY
DPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPALASLNDSNQFVNYTRSYHYDRA
GNLLKIQHTGASQYSTHITVSDSSNHGIQQQDGIIARDIRSQFDAAGNQQQLQPGQPLRWNSRNQLQQVEPVPRNDGISD
SESYLYDGSGRRVAKISLHKTHNAIQTRSVIYLAGLELRGQHNDNNLTESFQVITVGAAGRAQVRVLHWESGQPVDIVND
QLRYSFDNHLGSALIELDSDGDIISQEEYYPFGGTAVLASRNTVEAKYKTVRYSGKERDATGLYYYGYRYYQPWLGRWLS
ADPAGTIDGLNLYRMVRNNPIRWRDNNGLLTEEQINMYVNLFSNIGLKNDDELKSELLKYGLSEEEQNQIYLNMLRPMQS
GSSSSLFSFPSESSSSSGSTQSVDSGYLSPVRNYHFFEDIKLATMHRPYPKKQASSDTITYSAEDLTEASPIKILIGLDL
TSKNTQPYKSALAEKGIKYITKEKYEITDFFEEGGLSTEQIDLTVNKILKLQKKDLVGIHCGAGNGRSGVIASALSINKQ
YTTDKINSFDVTHSLRGSILKDTQTYQVDTVTAKAVGIIREINPKAVERNQDVISLYRYSHFLYTRKHTTSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tccC CAI77380.1 putative insecticidal toxin complex protein Not tested tc-PAIYe Protein 0.0 68
TccC5 AAO17210.1 TccC5 Virulence tcd island Protein 1e-150 55
TccC3 AAO17204.1 TccC3 Virulence tcd island Protein 1e-152 55
TccC2 AAL18492.2 TccC2 Virulence tcd island Protein 9e-153 54
TccC4 AAO17196.1 TccC4 Virulence tcd island Protein 2e-152 54