Gene Information

Name : ECO103_3588 (ECO103_3588)
Accession : YP_003223445.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3670587 - 3671072 bp
Length : 486 bp
Strand : +
Note : Integrative element ECO103_IE03

DNA sequence :
ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTGGCCGCTGCATCAGGGAATAACCAGTCTCAGTTGGT
TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTCACCTTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGCGAAAACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGCGGGGCATTTATGGCCCCCGAACCGGATGATGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGTATTGCCGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAGAATT
ATGCCATGACGGTCCATTATTACCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATT
GACTGA

Protein sequence :
MTTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCENYCGGIWNLYTLNN
GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 1e-63 100
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-61 99
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 5e-68 98
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 3e-67 97
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 8e-57 97
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 8e-62 96
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 8e-62 96
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 4e-62 96
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 9e-57 95
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 9e-57 95
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 3e-66 94
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 3e-65 93
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 3e-63 92
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 5e-65 92
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-58 89
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-58 89
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-58 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3588 YP_003223445.1 hypothetical protein VFG1616 Protein 2e-68 98
ECO103_3588 YP_003223445.1 hypothetical protein VFG1677 Protein 1e-67 97
ECO103_3588 YP_003223445.1 hypothetical protein VFG0659 Protein 3e-57 95
ECO103_3588 YP_003223445.1 hypothetical protein VFG1527 Protein 1e-66 94