Gene Information

Name : map (ECO103_3612)
Accession : YP_003223469.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS effector Map
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3691948 - 3692559 bp
Length : 612 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence :
ATGTTTAGTCCAATGACAATGGTAGGTAGATCGTTAGCTCAGGCGGCTACACAAACTCTTAGACCTGCGGTCACCAGAGC
TGCGACACAAGCGGGGGTGGGAGCCAGTGGTATGAAGTTCGTGCCCATGCAGTCGAACTTTATGATTAATCATGGCAAAC
TGACTAACCAGCTACTTCAGGCCGTGGCCAAACAAACCCGTAGCGGTGATACTCAGCAATGGTTCAAACAGGAGCAAATT
ACTTATATATCCAGAACAGTAAACAGAGCTATTGATGACTATTGCATGAGTAATAATTCGGTAATTGGTAAGGAGACCAA
AAGCCACATTTTCAAGGCTGTTGAAAGCGCGATAAAGCAGCCTCTCGATATGAATTGTGCACAAACGTCGATTGGCCATT
TCTTACAGTCCAACAAATACTTTAATAAAAAAGTTGATGAGCAGTGTGGCAAAGGGGGGGATCCAATTACACGCTTTAAC
ACCCAGACCAGGATGATAGAACAAGTCTCACAAGAAATCTTTGAACAGAAATTTGGTGGTTTGAAAGTTAGTGATATCAA
AGCTCTGACTCAGAGCACGATTGCACAGCATGTACAGGATACTCGGTTGTAG

Protein sequence :
MFSPMTMVGRSLAQAATQTLRPAVTRAATQAGVGASGMKFVPMQSNFMINHGKLTNQLLQAVAKQTRSGDTQQWFKQEQI
TYISRTVNRAIDDYCMSNNSVIGKETKSHIFKAVESAIKQPLDMNCAQTSIGHFLQSNKYFNKKVDEQCGKGGDPITRFN
TQTRMIEQVSQEIFEQKFGGLKVSDIKALTQSTIAQHVQDTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43868.1 hypothetical protein Not tested LEE Protein 1e-93 100
map YP_003223469.1 T3SS effector Map Virulence LEE Protein 2e-93 100
unnamed AAK26721.1 unknown Not tested LEE Protein 7e-93 99
unnamed AAL57548.1 unknown Not tested LEE Protein 7e-93 99
st30 CAC81868.1 ST30 protein Not tested LEE II Protein 7e-93 99
map YP_003232159.1 T3SS effector Map Virulence LEE Protein 1e-92 99
map YP_003236082.1 T3SS secreted effector Map Virulence LEE Protein 2e-78 83
Z5113 NP_290262.1 hypothetical protein Not tested LEE Protein 1e-78 81
ECs4562 NP_312589.1 hypothetical protein Not tested LEE Protein 1e-78 81
unnamed AAC31507.1 L0028 Not tested LEE Protein 1e-78 81
unnamed ACU09452.1 IpaB/EvcA family protein Not tested LEE Protein 1e-78 81
unnamed AAC38389.1 Orf19 Not tested LEE Protein 2e-78 80
unnamed AAL06375.1 unknown Virulence LEE Protein 2e-74 77

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
map YP_003223469.1 T3SS effector Map VFG0806 Protein 4e-79 81
map YP_003223469.1 T3SS effector Map VFG0736 Protein 1e-78 80