Gene Information

Name : ECO103_3617 (ECO103_3617)
Accession : YP_003223474.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3695223 - 3695600 bp
Length : 378 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence :
ATGTTGGACAGAATTTTATCTATTCGTAAAAGCAGAGCGAATCGATTGAGAGAATCAATGGCTAAGATTAACTCTCAGAT
AAAAGAGGTGGATGGTAAACTCGATGACTGCGAGCAAGTCATTAAAGAGTCGATTGCCTCTAAGCAGGCGTATTGTGCAT
CGCTGGTGAATCTGGATAAAGTGTCGTTGTATAAATACCAGATTAAAAACAATGCATTTGATGAGCAAAAGCAGCGATTA
TATGAGAAAAAATCCTCACTTTCTAAAGAAAAGCGTTCATTGCTCGATTCACAAAAACGAACAAAAGAGGATCTACAACA
TGTTAATAAATCAATAGAGAAGTTATCTTTTGCCATAAAGGAACATTACTTTGACTAG

Protein sequence :
MLDRILSIRKSRANRLRESMAKINSQIKEVDGKLDDCEQVIKESIASKQAYCASLVNLDKVSLYKYQIKNNAFDEQKQRL
YEKKSSLSKEKRSLLDSQKRTKEDLQHVNKSIEKLSFAIKEHYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3617 YP_003223474.1 T3SS component Virulence LEE Protein 3e-41 100
st25 CAC81863.1 ST25 protein Not tested LEE II Protein 5e-41 99
ECO26_5272 YP_003232154.1 T3SS component protein Virulence LEE Protein 7e-41 99
unnamed CAI43873.1 hypothetical protein Not tested LEE Protein 5e-41 99
unnamed AAK26716.1 unknown Not tested LEE Protein 3e-40 99
unnamed AAL57543.1 unknown Not tested LEE Protein 3e-40 99
unnamed AAC31512.1 L0033 Not tested LEE Protein 1e-40 98
ECs4567 NP_312594.1 hypothetical protein Not tested LEE Protein 1e-40 98
unnamed ACU09457.1 ST25 protein Not tested LEE Protein 1e-40 98
unnamed AAC38384.1 Orf15 Not tested LEE Protein 1e-40 98
Z5118 NP_290267.1 hypothetical protein Not tested LEE Protein 1e-40 98
ECO111_3751 YP_003236087.1 putative T3SS component protein Virulence LEE Protein 1e-40 97
unnamed AAL06370.1 unknown Not tested LEE Protein 1e-37 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3617 YP_003223474.1 T3SS component VFG0811 Protein 4e-41 98
ECO103_3617 YP_003223474.1 T3SS component VFG0731 Protein 4e-41 98