Gene Information

Name : garL (ECED1_3787)
Accession : YP_002399633.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : alpha-dehydro-beta-deoxy-D-glucarate aldolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3836
EC number : 4.1.2.20
Position : 3718537 - 3719304 bp
Length : 768 bp
Strand : -
Note : cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate

DNA sequence :
ATGAATAACGATGTTTTCCCGAATAAATTCAAAGCCGCACTGGCTGCGAAACAGGTACAAATTGGTTGCTGGTCAGCTCT
CTCTAACCCGATTAGCACTGAAGTTCTTGGTTTGGCTGGGTTTGACTGGCTGGTGCTGGATGGTGAACATGCGCCAAACG
ATATCTCCACGTTTATTCCGCAGTTAATGGCCCTGAAAGGCAGCGCCAGCGCGCCAGTAGTGCGAGTGCCGACCAACCCG
GTAATTATTAAGCGTCTTCTGGATATCGGTTTCTATAACTTCCTGATTCCTTTTGTAGAAACAAAAGAGGAAGCAGAGCA
GGCGGTGGCATCAACTCGTTACCCACCGGAAGGCATTCGCGGCGTCTCCGTTTCTCACCGCGCCAATATGTTTGGCACCG
TGGCGGATTATTTCGCTCAGTCGAACAAGAACATCACTATTCTGGTCCAGATAGAAAGTCAGCAGGGCGTAGATAACGTC
GATGCTATTGCCGCTACCGAAGGTGTAGACGGCATCTTCGTCGGCCCCAGCGATCTGGCTGCGGCATTAGGCCATCTCGG
CAATGCCTCGCACCCGGATGTACAAAAAGCAATTCAGCACATTTTTAACCGTGCCAGCGCGCACGGCAAACCCAGCGGCA
TCCTCGCACCAGTCGAGGCTGATGCGCGTCGTTATCTGGAATGGGGTGCGACGTTTGTGGCTGTCGGCAGCGATCTCGGC
ATCTTCCGCTCTGCCACTCAGAAACTGGCTGATACCTTTAAAAAATAA

Protein sequence :
MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNP
VIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNV
DAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDLG
IFRSATQKLADTFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 1e-48 47