Gene Information

Name : YPDSF_3698 (YPDSF_3698)
Accession : YP_001165021.1
Strain : Yersinia pestis Pestoides F
Genome accession: NC_009381
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 4250984 - 4251778 bp
Length : 795 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGACGTCCTCCCCGGTCTAACCGCACTCGCATTAGCCATGATGCGGCCCTACGGTATCTTACTGATATTACCGCT
GTTTACCGCCCGCAGTTTGGGGAGCAGCTTATTGCGTAATGGCTTGATTGTTGCCATCGCGCTGCCGGTCACGCCGCTAT
TTTTATCCGCACCCATCATCACCAATAGTAGCCCGGTCACCTGGATTGGGGTGTTATGCACGGAGCTACTCATTGGGGTG
GTGATGGGGTTTGTCGCCGCATTGCCTTTCTGGGCTATGAATATGGCGGGTTTCCTGATCGATACTTTACGGGGGGCAAC
GATGTCCACGTTGTTTAACCCCGGTATGGGCGTCGAATCCTCCCTTTTTGGTGTGCTGTTTACCCAAATATTAACGGTAC
TGTTCCTGATTTCTGGCGGTTTTAATCAGGTGTTGGCGGCGTTGTACGGCTCGTACGATAGCTTACCCATCGGCCAGGGT
ATCCAGCCTGCTGCAGATCTATTGCTCTTTCTGCAAACTGAGTGGCAGATGATGTTCGAGCTTTGCTTGTGCTTTGCCCT
ACCGGCACTGCTGGTCATGGTGTTGGCTGATCTCTCTTTAGGATTAATTAACCGCTCGGCCCGGCAACTGAATGTCTTTT
TTCTGGCGATGCCCATTAAAAGCGCACTGGCGCTTTTTCTCTTACTGATCAGCCTGCCTTATGGCCTGCATCACTACCTG
TCCCGTATGAGCGATACTGAACAGAAGATTGGTACGTTGATCCCGTTGATTAAAGGGGGGAATGATGTCCACTGA

Protein sequence : 
MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGV
VMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQG
IQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL
SRMSDTEQKIGTLIPLIKGGNDVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 4e-105 100
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 1e-44 52
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 9e-45 52
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 2e-44 51
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-44 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPDSF_3698 YP_001165021.1 type III secretion apparatus protein VFG0521 Protein 1e-44 51