Gene Information

Name : espF (ECO111_3734)
Accession : YP_003236070.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : T3SS secreted effector EspF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3720611 - 3721399 bp
Length : 789 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence : 
ATGCTTAATGGAATTAGTAACGCTGTTTCTACAATAGGGCTGCATCTTAGAGGTGTCGCAAGTCGAGTGGGCTCTGCGGG
GGTATCTGGATTTTCTGTAGCCCCTCAGACTGTGCGTCTTACTCCGGTGAGATTTCATTCCCCTTTTTCTCCAGGTTCGT
CGAATATTAATGCGAGAACGACTTTTAATATGAGTCATATGAGTCAGATGAGTCAGATGAGTCGTATGAGTCAGATGGCG
ACTTCATTTACTCCTACTCGCCCGGCACCACCGCCACCGACAAGTGGACAGGCATCCGGGTCTGCCGGGCTACCGCCCAT
TGCACAGGCATTAAAAGATCATTTAGCTGCCTATGAACTATCGAAAGCGTCTGAGACTGTAAGCTTTAAGCCAACCCGTC
AGGCACCCCCGCCACCAACAAGTGGACAGGCATCCGAGTCTGGTGGACTACCGCCCATTGCACAGGCATTAAAAGATCAT
TTAGCTGCCTATGAACTATCGAAAGCGTCTGAGACTGTAAGCTTTAAGCCAACCCGTCAGGCACCCCCGCCACCAACAAG
TGGACAGGCATCCGAGTCTGGTGGACTACCGCCCATTGCACAGGCATTAAAAGATCATTTAGCTGCCTATGAACTATCGA
AAGCGTCTGAGACTGTAAGCTTTAAGCCAACCCGTCAGGCACCCCCGCCACCAACAAGTGGACAGGCATCCGAGTCTGGT
GGACTACCGCCCATTGCACAGGCATTAAAAGATCATTTAGCTGCCTATGAGCAATCGAAAAAAGTATAA

Protein sequence : 
MLNGISNAVSTIGLHLRGVASRVGSAGVSGFSVAPQTVRLTPVRFHSPFSPGSSNINARTTFNMSHMSQMSQMSRMSQMA
TSFTPTRPAPPPPTSGQASGSAGLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASESGGLPPIAQALKDH
LAAYELSKASETVSFKPTRQAPPPPTSGQASESGGLPPIAQALKDHLAAYELSKASETVSFKPTRQAPPPPTSGQASESG
GLPPIAQALKDHLAAYEQSKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espF YP_003236070.1 T3SS secreted effector EspF Virulence LEE Protein 5e-95 100
espF AAC38400.1 EspF Virulence LEE Protein 2e-52 73
unnamed AAC31495.1 L0016 Not tested LEE Protein 3e-66 66
espF NP_290250.1 hypothetical protein Virulence LEE Protein 4e-66 66
unnamed ACU09440.1 LEE associated secreted protein EspF Virulence LEE Protein 3e-66 66
ECs4550 NP_312577.1 protein EspF Virulence LEE Protein 4e-66 66
espF YP_003232171.1 T3SS effector EspF Virulence LEE Protein 6e-39 64
espF AAL60256.1 EspF Virulence LEE Protein 5e-39 64
espF CAC81880.1 EspF protein Virulence LEE II Protein 5e-39 64
espF YP_003223457.1 T3SS effector EspF Virulence LEE Protein 3e-47 64
espF CAI43856.1 EspF protein Virulence LEE Protein 2e-47 64
unnamed AAL06387.1 EspF Virulence LEE Protein 4e-58 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espF YP_003236070.1 T3SS secreted effector EspF VFG0748 Protein 1e-52 73
espF YP_003236070.1 T3SS secreted effector EspF VFG0794 Protein 2e-66 66