Gene Information

Name : rorf8 (ECO111_3756)
Accession : YP_003236092.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : chaperone Rorf8
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3741318 - 3741746 bp
Length : 429 bp
Strand : +
Note : Integrative element ECO111_IE05; for T3SS

DNA sequence : 
ATGGATGCATTATGCCATTGCCTCTCTCATGAAAAGAGACTAACAGTAAATATGAATAATATTAATCAATCGAAAAACAT
TAATATTCAGTTAAATAAAGCATTCCAAACAAATGTCGTTGATGAGCATATCCCGTTAGCATCAACCCCCTCTGCAGCCG
GAGCGGCTCAGTTTCTTGATCAATTACTCCCTAAAACGGCGGGAGTGTCTTCCCCAGAACAAGTGTTGATTGAAGAAATT
AAAAAGCGACATCTTGCAACAATGAACACCGATCTCAGTTTCGATGCACTATCTGCAGGTGGGCTCTCGCCCGAAGATGT
ACTCACTTTACAAAAGAATGTGCTCAACGCAAACGTCAATGTTGATGTCGTATCTAAGTTAGCAAGCCTCCTTTCAACAT
CGGTTACAAAATTAGTTTCGATGCAATAA

Protein sequence : 
MDALCHCLSHEKRLTVNMNNINQSKNINIQLNKAFQTNVVDEHIPLASTPSAAGAAQFLDQLLPKTAGVSSPEQVLIEEI
KKRHLATMNTDLSFDALSAGGLSPEDVLTLQKNVLNANVNVDVVSKLASLLSTSVTKLVSMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rorf8 YP_003236092.1 chaperone Rorf8 Not tested LEE Protein 1e-38 100
unnamed AAC38380.1 rOrf8 Not tested LEE Protein 9e-37 98
unnamed AAL57538.1 unknown Not tested LEE Protein 2e-34 92
st20 CAC81858.1 ST20 protein Not tested LEE II Protein 2e-34 92
unnamed CAI43878.1 hypothetical protein Not tested LEE Protein 2e-34 92
ECO103_3622 YP_003223479.1 T3SS component Virulence LEE Protein 2e-34 92
rorf8 YP_003232149.1 T3SS component Virulence LEE Protein 2e-34 92
unnamed AAK26711.1 unknown Not tested LEE Protein 2e-34 92
Z5123 NP_290272.1 hypothetical protein Not tested LEE Protein 3e-27 91
ECs4572 NP_312599.1 hypothetical protein Not tested LEE Protein 3e-27 91
unnamed AAC31517.1 L0038 Not tested LEE Protein 2e-27 91
unnamed ACU09462.1 type III secretion apparatus domain protein YscI/HrpB Virulence LEE Protein 2e-27 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rorf8 YP_003236092.1 chaperone Rorf8 VFG0726 Protein 4e-37 98
rorf8 YP_003236092.1 chaperone Rorf8 VFG0816 Protein 8e-28 91