Gene Information

Name : ECO111_3769 (ECO111_3769)
Accession : YP_003236105.1
Strain : Escherichia coli 11128
Genome accession: NC_013364
Putative virulence/resistance : Virulence
Product : T3SS component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3750037 - 3750636 bp
Length : 600 bp
Strand : -
Note : Integrative element ECO111_IE05

DNA sequence :
ATGACAATTTTTAATAAAATAGACTATAACTACTATAAATTAATTAATTATCCAATCATGATGGTTCATGATGAATGGCT
AGGTGATTTAACCGGTGTCAATCAGGTCAGTTTTCGGCGTTTAAGAGAAACTAGTTCTACTCGTAATCAACTCAATAAGA
TATTGCGTCAGGAAATACAAGATAAAATTTCTGGTGTGGAATTATCTGACATAAATAAGGAAGGTTTTTTATATCAGTCA
ATTGGGAAAATAAGATTGCTTGCTCTAAGTAGTGCATTATTTGACATTCAATGCCCTGATTATATTTTCTCACGATTATA
TCGAGAAACTCTGATTAGAGAGATAGGATATCAAAATGTGAAGCAGTTATCATTCTATTGGCAGGGAGGGCAATGTAAAC
CAGAATATGGTGAAGAACGGTTTTGTGCTGAGTTAATAAAATACGGTGCAGGAAATTTGGAGTGGCTATTTGCTGATAAT
CCTTTATGGACCATAGTCAAATATCTTTTACCGAAAAGTGGAGAAATAAAACCAACTCATATTAATGATTTATTTCTTAA
CAGACTTAATAAAATTTTATTGCCTTATGAAACTTTATGA

Protein sequence :
MTIFNKIDYNYYKLINYPIMMVHDEWLGDLTGVNQVSFRRLRETSSTRNQLNKILRQEIQDKISGVELSDINKEGFLYQS
IGKIRLLALSSALFDIQCPDYIFSRLYRETLIREIGYQNVKQLSFYWQGGQCKPEYGEERFCAELIKYGAGNLEWLFADN
PLWTIVKYLLPKSGEIKPTHINDLFLNRLNKILLPYETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3769 YP_003236105.1 T3SS component Virulence LEE Protein 3e-90 100
unnamed AAC38367.1 Orf4 Not tested LEE Protein 2e-90 100
unnamed AAC31530.1 L0051 Not tested LEE Protein 3e-90 99
unnamed ACU09475.1 conserved hypothetical protein Not tested LEE Protein 3e-90 99
Z5137 NP_290285.1 hypothetical protein Not tested LEE Protein 4e-90 99
ECs4585 NP_312612.1 hypothetical protein Not tested LEE Protein 4e-90 99
unnamed CAI43891.1 hypothetical protein Not tested LEE Protein 5e-89 97
unnamed AAK26698.1 unknown Not tested LEE Protein 5e-89 97
ECO103_3635 YP_003223492.1 T3SS component Virulence LEE Protein 7e-89 97
unnamed AAL57525.1 unknown Not tested LEE Protein 5e-89 97
ECO26_5254 YP_003232136.1 T3SS component Virulence LEE Protein 7e-89 97
unnamed AAL57586.1 unknown Not tested LEE Protein 5e-89 97
st07 CAC81845.1 ST07 protein Not tested LEE II Protein 5e-89 97
unnamed AAL06352.1 unknown Not tested LEE Protein 6e-84 87
SESS1635_03846 AFO66398.1 hypothetical protein; possible LEE-encoded type III secretion system factor Not tested SESS LEE Protein 1e-54 53
SESS1296_03631 AFO66318.1 hypothetical protein; possible LEE-encoded type III secretion system factor Virulence SESS LEE Protein 4e-54 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO111_3769 YP_003236105.1 T3SS component VFG0713 Protein 9e-91 100
ECO111_3769 YP_003236105.1 T3SS component VFG0829 Protein 1e-90 99