Gene Information

Name : YpsIP31758_3820 (YpsIP31758_3820)
Accession : YP_001402774.1
Strain : Yersinia pseudotuberculosis IP 31758
Genome accession: NC_009708
Putative virulence/resistance : Virulence
Product : HrpE/YscL family type III secretion apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4304677 - 4305324 bp
Length : 648 bp
Strand : -
Note : identified by match to protein family HMM TIGR02499

DNA sequence :
GTGAACCCCTTTCACCTCGATATTGAAAAGTACGGTTATCCATTGCCGCCTGGCGTAGTTATTCCGGCGGCTTATCTGGC
AGAGGCCATGCACAGCCAGGATCTCTTGGCACAGGCCAACGCGCAAGCGGCAGAGATACTGCAAGCGGCGGAGCAGGCGC
GTGTGTTGTTGCTCGATCAAGCGGCGGAGCAGGCTGATGCACTGATCGGTCAGGCGCGTGTGCAGATGGAAACCGCACTG
CTCGCACAGCATGTTCGCTGGCTGGTGGGCGCGGAGCAATTGGAGTCGTTACTGATAACCCAAGTTCGCCACCGTATTTT
AGCCGCCATCACGTCAGTGGTAACGACCTGGAGCGGTGAACAACCGATGAGCCAGATTTTGATCCAGCGGCTGGGGGATC
AAGCAGAGAAAATGGCACAGCAAGGCGAATTAACATTACGGGTTCATCCACAGCATCTGCCAGCGGTGACCACCGCATTG
GGAGAGCGTCTGCGTTGTGTAGGGGATACGGAGATGGCCGCAGATCAGGCGCAACTCAGCTCTCCAATGCTGCAACTTAC
GCTTTCTCTCCACCACCATTTATCTCAACTGGTTCTGTGGCTACAGCAGTCGCCAGATCTTTTCGACGAAGAGAATGTTT
ATGAGTAA

Protein sequence :
MNPFHLDIEKYGYPLPPGVVIPAAYLAEAMHSQDLLAQANAQAAEILQAAEQARVLLLDQAAEQADALIGQARVQMETAL
LAQHVRWLVGAEQLESLLITQVRHRILAAITSVVTTWSGEQPMSQILIQRLGDQAEKMAQQGELTLRVHPQHLPAVTTAL
GERLRCVGDTEMAADQAQLSSPMLQLTLSLHHHLSQLVLWLQQSPDLFDEENVYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0265 YP_002345346.1 type III secretion system apparatus protein Virulence Not named Protein 3e-64 99